Family Search for PF13258 (DUF4049)

PF13258 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

yhiL / RF|NP_417947 putative uncharacterized protein yhiL from Escherichia coli K12 (see paper)
Aligns to 209:532 / 535 (60.6%), covers 100.0% of PF13258, 655.7 bits

YhiJ / b3488 DUF4049 domain-containing protein YhiJ from Escherichia coli K-12 substr. MG1655 (see paper)
b3488 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 194:503 / 540 (57.4%), covers 100.0% of PF13258, 597.5 bits

• The Mutant β^E202K Sliding Clamp Protein Impairs DNA Polymerase III Replication Activity
  Homiski, Journal of bacteriology 2021 (secret)
• Gap-filling analysis of the iJO1366 Escherichia coli metabolic network reconstruction for discovery of metabolic functions
  Orth, BMC systems biology 2012
  • “...this reaction using BLASTp. These genes were ydeN (b1498), yfdE (b2371), yphC (b2545), and yhiJ (b3488). The functions of these genes are currently unknown, and they are non-essential. The Keio Collection knockout strains for these four genes were then obtained and grown in both glucose and...”

ECs4361 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 194:503 / 540 (57.4%), covers 100.0% of PF13258, 585.0 bits

• Gene expression induced in Escherichia coli O157:H7 upon exposure to model apple juice
  Bergholz, Applied and environmental microbiology 2009
  • “...ECs3983 ECs4034 ECs4158 ECs4204 ECs4256 ECs4294 ECs4335 ECs4357 ECs4361 ECs4384 ECs4453 ECs4554 ECs4571 ECs4584 ECs4585 ECs4599 pchB O157 O157 O157 O157 O157...”

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