Family Search for PF13258 (DUF4049)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF13258 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

yhiL / RF|NP_417947 putative uncharacterized protein yhiL from Escherichia coli K12 (see paper)
Aligns to 209:532 / 535 (60.6%), covers 100.0% of PF13258, 655.7 bits

YhiJ / b3488 DUF4049 domain-containing protein YhiJ from Escherichia coli K-12 substr. MG1655 (see paper)
b3488 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 194:503 / 540 (57.4%), covers 100.0% of PF13258, 597.5 bits

• The Mutant β^E202K Sliding Clamp Protein Impairs DNA Polymerase III Replication Activity
  Homiski, Journal of bacteriology 2021 (secret)
• Gap-filling analysis of the iJO1366 Escherichia coli metabolic network reconstruction for discovery of metabolic functions
  Orth, BMC systems biology 2012
  • “...this reaction using BLASTp. These genes were ydeN (b1498), yfdE (b2371), yphC (b2545), and yhiJ (b3488). The functions of these genes are currently unknown, and they are non-essential. The Keio Collection knockout strains for these four genes were then obtained and grown in both glucose and...”

ECs4361 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 194:503 / 540 (57.4%), covers 100.0% of PF13258, 585.0 bits

• Gene expression induced in Escherichia coli O157:H7 upon exposure to model apple juice
  Bergholz, Applied and environmental microbiology 2009
  • “...ECs3983 ECs4034 ECs4158 ECs4204 ECs4256 ECs4294 ECs4335 ECs4357 ECs4361 ECs4384 ECs4453 ECs4554 ECs4571 ECs4584 ECs4585 ECs4599 pchB O157 O157 O157 O157 O157...”

Or search for genetic data about PF13258 in the Fitness Browser