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Family Search for PF13349 (DUF4097)

PF13349 hits 49 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

LIAG_BACSU / O32200 Protein LiaG from Bacillus subtilis (strain 168) (see 6 papers)
Aligns to 48:290 / 290 (83.8%), covers 100.0% of PF13349, 229.8 bits

lmo0601 similar to cell surface protein (NCBI ptt file) from Listeria monocytogenes EGD-e
3 alignments in 52:365 / 366 (85.8%), covering up to 67.1% of PF13349, 199.3 bits

BMD_0825 hypothetical protein (RefSeq) from Bacillus megaterium DSM319
BMD_0825 DUF4097 domain-containing protein from Priestia megaterium DSM 319
Aligns to 45:287 / 289 (84.1%), covers 99.6% of PF13349, 159.3 bits

SP_0098 hypothetical protein (RefSeq) from Streptococcus pneumoniae TIGR4
SPD_0094 hypothetical protein (NCBI) from Streptococcus pneumoniae D39
Aligns to 57:297 / 303 (79.5%), covers 99.6% of PF13349, 151.8 bits

spr0087 Hypothetical protein (NCBI ptt file) from Streptococcus pneumoniae R6
Aligns to 74:314 / 320 (75.3%), covers 99.6% of PF13349, 151.4 bits

YP_001449372 hypothetical protein (RefSeq) from Streptococcus gordonii str. Challis substr. CH1
Aligns to 53:334 / 337 (83.7%), covers 90.7% of PF13349, 117.3 bits

SM12261_RS08945 DUF4097 family beta strand repeat-containing protein from Streptococcus mitis NCTC 12261
Aligns to 57:303 / 315 (78.4%), covers 99.2% of PF13349, 113.5 bits

WP_005728236 DUF4097 family beta strand repeat-containing protein from Lactobacillus crispatus FB049-03
Aligns to 46:216 / 242 (70.7%), covers 70.3% of PF13349, 103.2 bits

EF0797 conserved domain protein (NCBI ptt file) from Enterococcus faecalis V583
2 alignments in 60:334 / 341 (80.6%), covering up to 63.8% of PF13349, 81.5 bits

WP_005729490 DUF4097 family beta strand repeat-containing protein from Lactobacillus crispatus FB077-07
Aligns to 23:225 / 225 (90.2%), covers 85.4% of PF13349, 80.7 bits

SERP1470 hypothetical protein (NCBI) from Staphylococcus epidermidis RP62A
Aligns to 44:278 / 278 (84.5%), covers 100.0% of PF13349, 76.8 bits

SE1920 conserved hypothetical protein (NCBI ptt file) from Staphylococcus epidermidis ATCC 12228
Aligns to 52:267 / 267 (80.9%), covers 99.6% of PF13349, 75.7 bits

LMRG_01762 hypothetical protein (RefSeq) from Listeria monocytogenes 10403S
Q8Y4F8 Lmo2486 protein from Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
lmo2486 lmo2486 (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 140:349 / 403 (52.1%), covers 78.9% of PF13349, 69.2 bits

LGG_00914 hypothetical protein (RefSeq) from Lactobacillus rhamnosus GG
LGG_00914 daptomycin-sensing surface protein LiaX from Lacticaseibacillus rhamnosus GG
Aligns to 245:492 / 496 (50.0%), covers 98.4% of PF13349, 68.9 bits

LMOf2365_2459 PspC domain protein (NCBI) from Listeria monocytogenes str. 4b F2365
Aligns to 140:348 / 403 (51.9%), covers 78.9% of PF13349, 68.5 bits

LMRG_01761 hypothetical protein (RefSeq) from Listeria monocytogenes 10403S
Aligns to 163:417 / 420 (60.7%), covers 84.1% of PF13349, 68.2 bits

Q8Y4F7 Lmo2487 protein from Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
lmo2487 similar to B. subtilis YvlB protein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 163:417 / 420 (60.7%), covers 84.1% of PF13349, 68.2 bits

OG1RF_11464 daptomycin-sensing surface protein LiaX from Enterococcus faecalis OG1RF
Aligns to 277:529 / 533 (47.5%), covers 97.6% of PF13349, 66.5 bits

EF1753 conserved hypothetical protein (NCBI ptt file) from Enterococcus faecalis V583
Aligns to 277:529 / 533 (47.5%), covers 97.6% of PF13349, 66.5 bits

O34628 Uncharacterized protein YvlB from Bacillus subtilis (strain 168)
Aligns to 107:360 / 365 (69.6%), covers 89.0% of PF13349, 65.0 bits

SA1740 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
MW1867 hypothetical protein (NCBI ptt file) from Staphylococcus aureus subsp. aureus MW2
Aligns to 45:280 / 280 (84.3%), covers 100.0% of PF13349, 62.4 bits

LACR_2166 hypothetical protein (NCBI) from Lactococcus lactis subsp. cremoris SK11
llmg_2164 hypothetical protein (NCBI) from Lactococcus lactis subsp. cremoris MG1363
Aligns to 115:366 / 370 (68.1%), covers 98.8% of PF13349, 62.2 bits

SO_3842 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
2 alignments in 40:316 / 318 (87.1%), covering up to 76.8% of PF13349, 61.8 bits

M7W_985 daptomycin-sensing surface protein LiaX from Enterococcus faecium ATCC 8459 = NRRL B-2354
Aligns to 266:518 / 522 (48.5%), covers 89.4% of PF13349, 59.6 bits

D2S332 Putative adhesin domain-containing protein from Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / JCM 9101 / NCIMB 13204 / VKM B-1734 / 4k)
Aligns to 116:273 / 276 (57.2%), covers 58.5% of PF13349, 56.9 bits

XCC1308 conserved hypothetical protein (NCBI ptt file) from Xanthomonas campestris pv. campestris str. ATCC 33913
Aligns to 36:291 / 294 (87.1%), covers 84.1% of PF13349, 56.2 bits

YP_702564 hypothetical protein (NCBI) from Rhodococcus sp. RHA1
Aligns to 11:279 / 281 (95.7%), covers 83.3% of PF13349, 53.4 bits

ROP_29250 hypothetical protein (RefSeq) from Rhodococcus opacus B4
Aligns to 12:279 / 281 (95.4%), covers 80.5% of PF13349, 49.6 bits

SACE_3262 hypothetical protein (RefSeq) from Saccharopolyspora erythraea NRRL 2338
Aligns to 20:276 / 282 (91.1%), covers 70.3% of PF13349, 48.3 bits

LSA0512 Hypothetical protein (NCBI) from Lactobacillus sakei subsp. sakei 23K
Aligns to 230:487 / 491 (52.5%), covers 83.3% of PF13349, 48.0 bits

AMED_1127 DUF4097 family beta strand repeat-containing protein from Amycolatopsis mediterranei U32
Aligns to 14:219 / 220 (93.6%), covers 70.3% of PF13349, 48.0 bits

Smlt3512 hypothetical protein (RefSeq) from Stenotrophomonas maltophilia K279a
Aligns to 35:290 / 293 (87.4%), covers 98.0% of PF13349, 48.0 bits

SPy2174 hypothetical protein (NCBI ptt file) from Streptococcus pyogenes M1 GAS
Aligns to 51:359 / 359 (86.1%), covers 100.0% of PF13349, 47.7 bits

SLUN_RS38415 DUF4097 family beta strand repeat-containing protein from Streptomyces lunaelactis
Aligns to 10:278 / 278 (96.8%), covers 90.2% of PF13349, 47.5 bits

YPO1174 hypothetical protein (NCBI ptt file) from Yersinia pestis CO92
2 alignments in 4:182 / 309 (57.9%), covering up to 39.8% of PF13349, 47.0 bits

Spy49_1783 hypothetical protein (RefSeq) from Streptococcus pyogenes NZ131
Aligns to 51:357 / 357 (86.0%), covers 100.0% of PF13349, 45.5 bits

SLUN_RS38540 DUF4097 family beta strand repeat-containing protein from Streptomyces lunaelactis
Aligns to 12:274 / 286 (92.0%), covers 73.6% of PF13349, 42.2 bits

YPTB1215 hypothetical protein (NCBI) from Yersinia pseudotuberculosis IP 32953
Aligns to 95:182 / 309 (28.5%), covers 27.6% of PF13349, 40.7 bits

PG_RS01865 head GIN domain-containing protein from Porphyromonas gingivalis W83
Aligns to 45:262 / 286 (76.2%), covers 82.1% of PF13349, 40.3 bits

PG0419 hypothetical protein (NCBI) from Porphyromonas gingivalis W83
Aligns to 60:276 / 301 (72.1%), covers 82.1% of PF13349, 40.1 bits

PGN_1548 hypothetical protein (RefSeq) from Porphyromonas gingivalis ATCC 33277
Aligns to 45:261 / 286 (75.9%), covers 82.1% of PF13349, 39.9 bits

CG8187 uncharacterized protein from Drosophila melanogaster
Aligns to 182:348 / 376 (44.4%), covers 41.5% of PF13349, 38.8 bits

Q8N0U4 Protein FAM185A from Homo sapiens
Aligns to 206:351 / 392 (37.2%), covers 47.2% of PF13349, 38.4 bits

M3FS09 Lipoprotein from Streptomyces bottropensis ATCC 25435
Aligns to 147:288 / 291 (48.8%), covers 59.3% of PF13349, 38.3 bits

FRAAL2567 hypothetical protein (NCBI) from Frankia alni ACN14a
Aligns to 13:278 / 280 (95.0%), covers 93.9% of PF13349, 37.0 bits

XAC1545 conserved hypothetical protein (NCBI ptt file) from Xanthomonas axonopodis pv. citri str. 306
Aligns to 43:272 / 272 (84.6%), covers 64.2% of PF13349, 35.6 bits

XOO2060 hypothetical protein (NCBI) from Xanthomonas oryzae pv. oryzae KACC10331
Aligns to 69:277 / 278 (75.2%), covers 62.2% of PF13349, 35.6 bits

Bd2093 hypothetical protein (NCBI) from Bdellovibrio bacteriovorus HD100
Q6MLC0 Uncharacterized protein from Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100)
Aligns to 36:333 / 333 (89.5%), covers 84.1% of PF13349, 31.9 bits

CD1347 hypothetical protein (RefSeq) from Clostridium difficile 630
Aligns to 55:249 / 356 (54.8%), covers 59.3% of PF13349, 30.0 bits

Or search for genetic data about PF13349 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory