PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF13698 (DUF4156)

PF13698.6 hits 9 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

STM0349 putative outer membrane lipoprotein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 19:117 / 119 (83.2%), covers 100.0% of PF13698, 116.2 bits

YjeI / b4144 DUF4156 domain-containing lipoprotein YjeI from Escherichia coli K-12 substr. MG1655 (see 3 papers)
b4144 orf, hypothetical protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 23:115 / 117 (79.5%), covers 100.0% of PF13698, 111.1 bits

UTI89_C4742 hypothetical protein (NCBI) from Escherichia coli UTI89
S4565 hypothetical protein (NCBI ptt file) from Shigella flexneri 2a str. 2457T
Z5749 orf, hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 34:126 / 128 (72.7%), covers 100.0% of PF13698, 110.8 bits

YPTB0406 putative lipoprotein (NCBI) from Yersinia pseudotuberculosis IP 32953
YPO0352 putative lipoprotein (NCBI ptt file) from Yersinia pestis CO92
Aligns to 36:127 / 128 (71.9%), covers 98.9% of PF13698, 110.3 bits

SPA4148 putative membrane protein (NCBI) from Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
Aligns to 29:121 / 123 (75.6%), covers 100.0% of PF13698, 105.4 bits

FTL_0491 outer membrane lipoprotein (NCBI) from Francisella tularensis subsp. holarctica
Aligns to 24:126 / 131 (78.6%), covers 98.9% of PF13698, 83.5 bits

XF1971 hypothetical protein (NCBI ptt file) from Xylella fastidiosa 9a5c
Aligns to 17:100 / 103 (81.6%), covers 95.6% of PF13698, 42.7 bits

XAC0232 conserved hypothetical protein (NCBI ptt file) from Xanthomonas axonopodis pv. citri str. 306
Aligns to 16:99 / 102 (82.4%), covers 97.8% of PF13698, 41.4 bits

XOO4208 hypothetical protein (NCBI) from Xanthomonas oryzae pv. oryzae KACC10331
Aligns to 20:103 / 106 (79.2%), covers 97.8% of PF13698, 41.3 bits

Or search for genetic data about PF13698 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory