Family Search for PF13926 (DUF4211)
April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.
PF13926 hits 9 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.
XP_005274349 coiled-coil domain-containing protein 82 isoform X1 from Homo sapiens
Q8N4S0 Coiled-coil domain-containing protein 82 from Homo sapiens
Aligns to 297:449 / 544 (28.1%), covers 100.0% of PF13926, 120.4 bits
YE06_SCHPO / O13803 Uncharacterized protein C17H9.06c from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 2 papers)
Aligns to 366:499 / 601 (22.3%), covers 99.3% of PF13926, 116.8 bits
F1MEZ4 Coiled-coil domain containing 82 from Bos taurus
Aligns to 278:427 / 522 (28.7%), covers 99.3% of PF13926, 114.4 bits
- Silver nanoparticle protein corona composition in cell culture media
Shannahan, PloS one 2013 - “...stabilized silver E1BK41 ADAMTSL1 ADAMTS-like 1 (Punctin-1) 557,764 E1BMW2 AP2A1 AP-2 complex subunit alpha-1 1,701,020 F1MEZ4 CCDC82 Coiled-coil domain containing 82 4,096,417 E1BK20 GCKR Glucokinase regulatory protein 2,656,407 F1MXJ6 KALRN Kalirin 10,814,400 A1L595 KRT17 Keratin, type I cytoskeletal 17 2,022,711 A1A4K4 LLGL1 Lethal giant larvae homolog...”
CNAG_07564 hypothetical protein from Cryptococcus neoformans var. grubii H99
Aligns to 399:534 / 712 (19.1%), covers 100.0% of PF13926, 100.1 bits
- Rad53- and Chk1-Dependent DNA Damage Response Pathways Cooperatively Promote Fungal Pathogenesis and Modulate Antifungal Drug Susceptibility
Jung, mBio 2019 - “...analyze those in the following categories: (i) evolutionarily divergent genes, such as C. neoformans 07564 (CNAG_07564), CNAG_05341, and CNAG_03906, and (ii) evolutionarily conserved but hitherto-uncharacterized C. neoformans genes. The latter included CNAG_02512 and CNAG_03654, which are highly orthologous to S. cerevisiae Rad16 and Sgs1, respectively. First,...”
- “...genes induced after radiation exposure in our previous study ( 25 ), we designated CNAG_05341, CNAG_07564, and CNAG_03906 RIG4 , RIG5 , and RIG6 , respectively. To elucidate the function of the five Rad53-dependent genes, we generated rig4 , rig5 , rig6 , rad16 , and...”
QSER1_HUMAN / Q2KHR3 Glutamine and serine-rich protein 1 from Homo sapiens (Human) (see paper)
Aligns to 1485:1646 / 1735 (9.3%), covers 96.4% of PF13926, 81.8 bits
- function: Plays an essential role in the protection and maintenance of transcriptional and developmental programs. Protects many bivalent promoters and poised enhancers from hypermethylation, showing a marked preference for these regulatory elements over other types of promoters or enhancers. Mechanistically, cooperates with TET1 and binds to DNA in a common complex to inhibit the binding of DNMT3A/3B and therefore de novo methylation.
subunit: Interacts with TET1. - Systematic identification of recognition motifs for the hub protein LC8
Jespersen, Life science alliance 2019 - “...POU2F1 ESGDGNTG TQT NGL 13 26 N P35568 IRS1 LPRKVDTA AQT NSR 841 854 N Q2KHR3 QSER1 KTLTFSGS SQT VTP 374 387 N Q99814 EPAS1 TEAKDQCS TQT DFN 509 522 N Q9Y4K1 CRYBG1 RSFVLPVES TQD VSSQ 550 565 N P49862 KLK7 SFRHPGYS TQT HVN 98 111...”
- Identification of the BRD1 interaction network and its impact on mental disorder risk.
Fryland, Genome medicine 2016 - “...ribosomal protein S14 1.510 3 ING4 Q9UNL4 Inhibitor of growth protein 4 6.210 3 QSER1 Q2KHR3 Glutamine and serine-rich protein 1 6.410 3 2 YWHAZ P63104 14-3-3 protein zeta/delta <110 10 CLTC Q00610 Clathrin heavy chain 1 9.810 4 3 H3F3A/HIST1H3/HIST3H3 c P84243/P68431/Q16695 c Histone H3.3/Histone...”
- Glycopeptide-specific monoclonal antibodies suggest new roles for O-GlcNAc.
Teo, Nature chemical biology 2010 - “...(14) CTD110.6 P49790 NUP153 Nuclear pore complex protein Nup153 3 6 30 22 Tp N Q2KHR3 QSER1 Glutamine and serine-rich protein 1 (FLJ21924) 1 2 11 3 U U Q02543 RPL18A 60S ribosomal protein L18a 4 3 3 3 Tl C No,M P35658 NUP214 Nuclear pore...”
XP_047283567 glutamine and serine-rich protein 1 isoform X1 from Homo sapiens
Aligns to 1666:1826 / 1915 (8.4%), covers 96.4% of PF13926, 81.5 bits
Q8IQV6 Uncharacterized protein, isoform A from Drosophila melanogaster
Aligns to 934:1073 / 1173 (11.9%), covers 89.1% of PF13926, 60.1 bits
- The protein-protein interaction network of eyestalk, Y-organ and hepatopancreas in Chinese mitten crab Eriocheir sinensis
Hao, BMC systems biology 2014 - “...as receptors of signaling factor or the regulators of signaling pathways. For example, 16 proteins (Q8IQV6, Q7JXG9, Q8IR25, D3ZE26, Q9V3S7, Q9V3A8, Q7KMH9, Q7JPS2, Q9VVK8, Q9W1A7, Q7KN04, Q8SZY2, Q9VUP0, Q9VVU1, Q9VLK8, A1ZA45) were annotated as Hippo signaling cascade and 12 other proteins (Q8IQV6, Q7JXG9, Q8IR25, Q9V3S7, Q9V3A8,...”
PRR12_MOUSE / E9PYL2 Proline-rich protein 12 from Mus musculus (Mouse) (see paper)
Aligns to 1817:1944 / 2035 (6.3%), covers 83.9% of PF13926, 46.3 bits
PRR12_HUMAN / Q9ULL5 Proline-rich protein 12 from Homo sapiens (Human) (see 3 papers)
Aligns to 1819:1945 / 2036 (6.2%), covers 83.2% of PF13926, 46.1 bits
Or search for genetic data about PF13926 in the Fitness Browser
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory