Family Search for PF17263 (DUF5329)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF17263 hits 6 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Jab_2c26600 DUF5329 domain-containing protein from Janthinobacterium sp. HH01
Aligns to 24:118 / 125 (76.0%), covers 98.9% of PF17263, 115.4 bits

• Molecular Keys to the Janthinobacterium and Duganella spp. Interaction with the Plant Pathogen Fusarium graminearum
  Haack, Frontiers in microbiology 2016
  • “...Jab_2c26580 Predicted short-chain dehydrogenase/reductase 8.77 II 353.35 Jab_2c26590 Predicted transcriptional regulator AraC family 3.96 II Jab_2c26600 * Hypothetical protein 1.14 II Other Jab_1c10070 Putative serine/threonine protein kinase 2.48 II n Jab_1c13730 Predicted porin 2.24 I + II HH104 n Jab_1c18190 Putative polysaccharide deacetylase +2.3 II y...”

STM2438 putative periplasmic protein from Salmonella typhimurium LT2
Aligns to 29:122 / 126 (74.6%), covers 97.9% of PF17263, 109.1 bits

• Salmonella serovar identification using PCR-based detection of gene presence and absence
  Arrach, Journal of clinical microbiology 2008
  • “...STM1869A, STM2030, STM2033, STM2055, STM2094, STM2177, STM2438, STM2591, STM2601, STM2700, STM2904, STM3033, STM3034, STM3125, STM3358, STM3546, STM3652,...”

SENTW_2617 YfeK family protein from Salmonella enterica subsp. enterica serovar Weltevreden str.
Aligns to 29:122 / 125 (75.2%), covers 97.9% of PF17263, 109.1 bits

• Transcriptional profile of Salmonella enterica subsp. enterica serovar Weltevreden during alfalfa sprout colonization
  Brankatschk, Microbial biotechnology 2014
  • “...Protein YdgH ygaU SENTW_2883 5.51 Uncharacterized protein YgaU yggE SENTW_3181 6.70 Uncharacterized protein YggE yfeK SENTW_2617 5.38 Uncharacterized protein YfeK yjfN SENTW_4481 6.70 UPF0379 protein YjfN Genes more transcribed in presence of sprouts According to Kyoto Encyclopedia of Genes and Genomes (KEGG) categorization, genes significantly more...”

UTI89_C2753 hypothetical protein YfeK precursor from Escherichia coli UTI89
Aligns to 23:116 / 122 (77.0%), covers 97.9% of PF17263, 107.3 bits

• Cathelicidin Peptides Restrict Bacterial Growth via Membrane Perturbation and Induction of Reactive Oxygen Species
  Rowe-Magnus, mBio 2019
  • “...translocase subunit secY UTI89_C4299 1.38 2.48E03 Aspartate-ammonia ligase asnA UTI89_C2011 1.39 5.23E03 c-di-GMP phosphodiesterase ardB UTI89_C2753 1.41 4.31E03 Hypothetical protein yfeK UTI89_C2302 1.41 1.03E03 6-Phosphogluconate dehydrogenase gnd UTI89_C4380 1.48 2.31E03 Hypothetical protein orf UTI89_C1019 1.48 2.79E03 3-Hydroxyacyl-[acyl-carrier protein] dehydratase fabA UTI89_C5174 1.55 1.24E03 Two-component system response...”

c2954 Hypothetical protein yfeK precursor from Escherichia coli CFT073
Aligns to 23:116 / 122 (77.0%), covers 97.9% of PF17263, 107.3 bits

• Identification of in vivo-induced antigens including an RTX family exoprotein required for uropathogenic Escherichia coli virulence
  Vigil, Infection and immunity 2011
  • “...c0530 c2065 c5370 c0445 c1590/3154 c2344 c5347-c5348 c3664 c2954 c2770 c4743 c3779 c3293-c3291 c0446 c5470 c0498 c5419 c2381 c4480 c1511 Function of gene...”

YfeK / b2419 DUF5329 domain-containing protein YfeK from Escherichia coli K-12 substr. MG1655 (see 2 papers)
Q47702 Uncharacterized protein YfeK from Escherichia coli (strain K12)
Aligns to 23:116 / 124 (75.8%), covers 97.9% of PF17263, 105.8 bits

• Optimized Signal Peptide for Secretory Expression of Human Recombinant Somatropin in E. coli
  Ahmadi, Advanced pharmaceutical bulletin 2023
  • “...Escherichia coli (strain K12) P37387 MKIKNILLTLCTSLLLTNVAAHA Uncharacterized protein yfeK yfeK 19 Escherichia coli (strain K12) Q47702 MKKIICLVITLLMTLPVYA UPF0379 protein yhcN yhcN 22 Escherichia coli (strain K12) P64614 MKIKTTVAALSVLSVLSFGAFA Uncharacterized protein yncJ yncJ 22 Escherichia coli (strain K12) P64459 MFTKALSVVLLTCALFSGQLMA UPF0482 protein ynfB ynfB 28 Escherichia coli...”
• Knowns and Unknowns of Vitamin B₆ Metabolism in Escherichia coli
  Tramonti, EcoSal Plus 2021
  • “...detail. Downstream pdxK, and transcribed in the opposite direction, yfeK encodes an uncharacterized protein (UniProt Q47702). ybhA The ybhA gene (located between 797,613 and 798,431kb of the E. coli genome) encodes a phosphatase (UniProt P21829) belonging to the superfamily of haloacid dehalogenase (HAD)-like hydrolases. In vitro...”

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