Family Search for PF19741 (DUF6230)
April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.
PF19741 hits 10 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.
C9Z6Y6 Cholesterol esterase from Streptomyces scabiei (strain 87.22)
Aligns to 52:219 / 219 (76.7%), covers 100.0% of PF19741, 204.0 bits
- Physical, Chemical and Proteomic Evidence of Potato Suberin Degradation by the Plant Pathogenic Bacterium Streptomyces scabiei
Beaulieu, Microbes and environments 2016 - “...( 17 ). The abundance of most lipases and esterases detected in this study (Sub1, C9Z6Y6, C9YUN4, C9Z1F6, and C9YTK3) increased over time. The maximal production of these lipolytic enzymes in the late phase of the culture may reflect the bacterial growth phase. In some streptomycetes,...”
- “...Carbohydrate metabolism class (% within the class) Day 10 Day 20 Day 30 Day 60 C9Z6Y6 Cholesterol esterase 0.54 (39.42) 0.68 (34.17) 1.20 (34.19) 1.25 (33.42) C9Z1F6 Lipase 0.22 (16.06) 0.36 (18.09) 0.56 (15.95) 0.62 (16.58) C9YTK3 Lipase 0.11 (8.03) 0.28 (14.01) 0.44 (12.54) 0.36 (9.63)...”
- Comparative secretome analysis of Streptomyces scabiei during growth in the presence or absence of potato suberin
Komeil, Proteome science 2014 - “...esterases not specifically produced in the presence of suberin, for instance C9ZG71 (esterase A) and C9Z6Y6 (cholesterol esterase), might nevertheless play a role in suberin degradation (Additional file 1 : Table S1). In a previous study, esterase A was detected in S. scabiei suberin-containing culture medium...”
SLIV_11405 DUF6230 family protein from Streptomyces lividans TK24
Aligns to 44:215 / 215 (80.0%), covers 100.0% of PF19741, 198.1 bits
SCO5420 cholesterol esterase from Streptomyces coelicolor A3(2)
Aligns to 44:215 / 215 (80.0%), covers 100.0% of PF19741, 195.7 bits
Q2AAT6 sterol esterase (EC 3.1.1.13) from Streptomyces sp. (see paper)
Aligns to 44:217 / 217 (80.2%), covers 100.0% of PF19741, 195.6 bits
Q82JC7 sterol esterase (EC 3.1.1.13) from Streptomyces avermitilis (see paper)
Aligns to 44:214 / 214 (79.9%), covers 100.0% of PF19741, 187.4 bits
C9YUN4 Putative exported esterase from Streptomyces scabiei (strain 87.22)
Aligns to 62:219 / 220 (71.8%), covers 97.3% of PF19741, 143.7 bits
- Physical, Chemical and Proteomic Evidence of Potato Suberin Degradation by the Plant Pathogenic Bacterium Streptomyces scabiei
Beaulieu, Microbes and environments 2016 - “...17 ). The abundance of most lipases and esterases detected in this study (Sub1, C9Z6Y6, C9YUN4, C9Z1F6, and C9YTK3) increased over time. The maximal production of these lipolytic enzymes in the late phase of the culture may reflect the bacterial growth phase. In some streptomycetes, esterases...”
- “...(18.09) 0.56 (15.95) 0.62 (16.58) C9YTK3 Lipase 0.11 (8.03) 0.28 (14.01) 0.44 (12.54) 0.36 (9.63) C9YUN4 Cholesterol esterase 0.03 (2.19) 0.10 (5.03) 0.14 (3.99) 0.15 (4.10) C9ZCR8 Suberinase (Sub1) 0.00 (0.00) 0.14 (7.34) 0.26 (7.41) 0.37 (9.89) C9Z5Z2 Glycerophosphoryl diester phosphodiesterase 0.10 (7.30) 0.14 (7.04) 0.18...”
jk2054 putative cholesterol esterase from Corynebacterium jeikeium K411
Aligns to 39:191 / 191 (80.1%), covers 99.3% of PF19741, 87.2 bits
GK3040 DUF6230 family protein from Geobacillus kaustophilus HTA426
YP_148893 hypothetical protein from Geobacillus kaustophilus HTA426
Aligns to 49:195 / 196 (75.0%), covers 92.5% of PF19741, 54.3 bits
- A novel alkane monooxygenase evolved from a broken piece of ribonucleotide reductase in Geobacillus kaustophilus HTA426 isolated from Mariana Trench
Nithimethachoke, Extremophiles : life under extreme conditions 2024 - “...hydratase; (GK3008), 3-hydroxyacyl-CoA dehydrogenase; and GK2777 (GK3007), thiolase/acetyl-CoA acetyltransferase. Surprisingly, the hypothetical proteins GK2770 and GK3040 were orthologous to P21 (99.5% identity, 200/201 aa) and P16 (94.4% identity, 185/196 aa), which are alkane-inducible membrane transporters in G. thermoleovorans B23 (Kato et al. 2009 ). Recently, P21...”
- Alkane inducible proteins in Geobacillus thermoleovorans B23
Kato, BMC microbiology 2009 - “...genome sequence, there are genes encoding orthologous proteins to P21 (YP_148623, 99% identical) and P16 (YP_148893, 94% identical). On the other hand, to our most surprise there is no corresponding gene in the genome of G. thermodenitrificans . Gene expression levels of P21 and P16 Because...”
A0A098L147 Uncharacterized protein from Geobacillus thermoleovorans B23
Aligns to 49:195 / 196 (75.0%), covers 92.5% of PF19741, 53.9 bits
YP_148623 hypothetical protein from Geobacillus kaustophilus HTA426
GK2770 DUF6230 family protein from Geobacillus kaustophilus HTA426
Aligns to 43:194 / 201 (75.6%), covers 93.2% of PF19741, 40.5 bits
- Alkane inducible proteins in Geobacillus thermoleovorans B23
Kato, BMC microbiology 2009 - “...When we look into its genome sequence, there are genes encoding orthologous proteins to P21 (YP_148623, 99% identical) and P16 (YP_148893, 94% identical). On the other hand, to our most surprise there is no corresponding gene in the genome of G. thermodenitrificans . Gene expression levels...”
- A novel alkane monooxygenase evolved from a broken piece of ribonucleotide reductase in Geobacillus kaustophilus HTA426 isolated from Mariana Trench
Nithimethachoke, Extremophiles : life under extreme conditions 2024 - “...reductase; enoyl-CoA hydratase; (GK3008), 3-hydroxyacyl-CoA dehydrogenase; and GK2777 (GK3007), thiolase/acetyl-CoA acetyltransferase. Surprisingly, the hypothetical proteins GK2770 and GK3040 were orthologous to P21 (99.5% identity, 200/201 aa) and P16 (94.4% identity, 185/196 aa), which are alkane-inducible membrane transporters in G. thermoleovorans B23 (Kato et al. 2009 )....”
Or search for genetic data about PF19741 in the Fitness Browser
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory