PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF20173 (ZnF_RZ-type)

PF20173 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

AFUA_2G05180 NF-X1 finger and helicase domain protein, putative from Aspergillus fumigatus Af293
Aligns to 1848:1901 / 1914 (2.8%), covers 100.0% of PF20173, 81.0 bits

ZNFX1_MOUSE / Q8R151 NFX1-type zinc finger-containing protein 1 from Mus musculus (Mouse) (see paper)
XP_006500519 NFX1-type zinc finger-containing protein 1 isoform X1 from Mus musculus
Aligns to 1826:1880 / 1909 (2.9%), covers 85.2% of PF20173, 79.2 bits

R213A_DANRE / A0A0R4IBK5 E3 ubiquitin-protein ligase rnf213-alpha; E3 ubiquitin-lipopolysaccharide ligase rnf213-alpha; Mysterin-A; Mysterin-alpha; RING finger protein 213-A; RING finger protein 213-alpha; EC 2.3.2.27; EC 3.6.4.-; EC 2.3.2.- from Danio rerio (Zebrafish) (Brachydanio rerio) (see 4 papers)
XP_021330430 E3 ubiquitin-protein ligase rnf213-alpha from Danio rerio
Aligns to 4494:4547 / 5209 (1.0%), covers 96.3% of PF20173, 79.1 bits

NP_001376200 NFX1-type zinc finger-containing protein 1 from Rattus norvegicus
Aligns to 1824:1879 / 1907 (2.9%), covers 85.2% of PF20173, 79.1 bits

LOC101857249 NFX1-type zinc finger-containing protein 1 from Aplysia californica
Aligns to 1797:1851 / 1887 (2.9%), covers 87.0% of PF20173, 77.7 bits

U3IUP4 Zinc finger NFX1-type containing 1 from Anas platyrhynchos platyrhynchos
Aligns to 2026:2081 / 2110 (2.7%), covers 85.2% of PF20173, 77.0 bits

ZNFX1_HUMAN / Q9P2E3 NFX1-type zinc finger-containing protein 1 from Homo sapiens (Human) (see 3 papers)
Aligns to 1834:1889 / 1918 (2.9%), covers 85.2% of PF20173, 76.2 bits

I3L5Z9 Zinc finger NFX1-type containing 1 from Sus scrofa
Aligns to 1842:1897 / 1926 (2.9%), covers 87.0% of PF20173, 75.6 bits

A0A662Z298 E3 ubiquitin-protein ligase RNF213 from Acipenser ruthenus
Aligns to 4423:4478 / 5134 (1.1%), covers 96.3% of PF20173, 70.2 bits

RN213_HUMAN / Q63HN8 E3 ubiquitin-protein ligase RNF213; ALK lymphoma oligomerization partner on chromosome 17; E3 ubiquitin-lipopolysaccharide ligase RNF213; Mysterin; RING finger protein 213; EC 2.3.2.27; EC 3.6.4.-; EC 2.3.2.- from Homo sapiens (Human) (see 28 papers)
Aligns to 4490:4545 / 5207 (1.1%), covers 85.2% of PF20173, 70.1 bits

NP_001243000 E3 ubiquitin-protein ligase RNF213 isoform 3 from Homo sapiens
Aligns to 4490:4545 / 5207 (1.1%), covers 85.2% of PF20173, 70.1 bits

F1M0R1 Ring finger protein 213 from Rattus norvegicus
Aligns to 4415:4469 / 5126 (1.1%), covers 81.5% of PF20173, 67.8 bits

XP_038943469 E3 ubiquitin-protein ligase RNF213 isoform X1 from Rattus norvegicus
Aligns to 4490:4544 / 5201 (1.1%), covers 81.5% of PF20173, 67.8 bits

DDB_G0278761 NF-X1-type zinc finger-containing protein from Dictyostelium discoideum AX4
Aligns to 1717:1772 / 1793 (3.1%), covers 96.3% of PF20173, 67.2 bits

XP_006534693 E3 ubiquitin-protein ligase RNF213 isoform X1 from Mus musculus
Aligns to 4480:4535 / 5192 (1.1%), covers 85.2% of PF20173, 66.8 bits

RN213_MOUSE / E9Q555 E3 ubiquitin-protein ligase RNF213; E3 ubiquitin-lipopolysaccharide ligase RNF213; Mysterin; RING finger protein 213; EC 2.3.2.27; EC 3.6.4.-; EC 2.3.2.- from Mus musculus (Mouse) (see 6 papers)
Aligns to 4436:4491 / 5148 (1.1%), covers 85.2% of PF20173, 66.8 bits

E1BHN4 Uncharacterized protein from Bos taurus
Aligns to 4303:4358 / 5015 (1.1%), covers 85.2% of PF20173, 64.9 bits

R213B_DANRE / A0A0R4I9Y1 E3 ubiquitin-protein ligase rnf213-beta; E3 ubiquitin-lipopolysaccharide ligase rnf213-beta; Mysterin-B; Mysterin-beta; RING finger protein 213-B; RING finger protein 213-beta; EC 2.3.2.27; EC 3.6.4.-; EC 2.3.2.- from Danio rerio (Zebrafish) (Brachydanio rerio) (see 2 papers)
Aligns to 4437:4491 / 5061 (1.1%), covers 85.2% of PF20173, 58.3 bits

Or search for genetic data about PF20173 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory