PaperBLAST – Find papers about a protein or its homologs

 

PaperBLAST

PaperBLAST Hits for CharProtDB::CH_002452 phosphoglucomutase; EC 5.4.2.2 (Escherichia coli K12) (546 a.a., MAIHNRAGQP...)

Other sequence analysis tools:

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Found 250 similar proteins in the literature:

UTI89_C0693 phosphoglucomutase from Escherichia coli UTI89
100% identity, 97% coverage

EC958_0806 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Escherichia coli O25b:H4-ST131
100% identity, 100% coverage

Blu / b0688 phosphoglucomutase (EC 5.4.2.2) from Escherichia coli K-12 substr. MG1655 (see 11 papers)
pgm / P36938 phosphoglucomutase (EC 5.4.2.2) from Escherichia coli (strain K12) (see 11 papers)
PGM_ECOLI / P36938 Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Escherichia coli (strain K12) (see 2 papers)
pgm / GB|ABB65241.1 phosphoglucomutase; EC 5.4.2.2 from Escherichia coli K12 (see 6 papers)
b0688 phosphoglucomutase from Escherichia coli str. K-12 substr. MG1655
100% identity, 100% coverage

c0775 Phosphoglucomutase from Escherichia coli CFT073
100% identity, 97% coverage

Z0837 phosphoglucomutase from Escherichia coli O157:H7 EDL933
99% identity, 100% coverage

A0A0H3NJ17 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
Q8ZQW9 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
NP_459683 phosphoglucomutase from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
STM0698 phosphoglucomutase from Salmonella typhimurium LT2
STM14_0815 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
98% identity, 100% coverage

2fuvA / Q8ZQW9 Phosphoglucomutase from salmonella typhimurium.
98% identity, 100% coverage

KP1_1664 phosphoglucomutase from Klebsiella pneumoniae NTUH-K2044
96% identity, 99% coverage

A6T6D3 Phosphoglucomutase from Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
96% identity, 100% coverage

VK055_1820 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Klebsiella pneumoniae subsp. pneumoniae
96% identity, 100% coverage

t2177 phosphoglucomutase from Salmonella enterica subsp. enterica serovar Typhi Ty2
98% identity, 100% coverage

ENT638_RS06320 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Enterobacter sp. 638
94% identity, 100% coverage

PMPD1_1435 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Paramixta manurensis
89% identity, 100% coverage

H3RAQ5 Phosphoglucomutase from Pantoea stewartii subsp. stewartii DC283
88% identity, 100% coverage

YPO2686 phosphoglucomutase from Yersinia pestis CO92
83% identity, 100% coverage

y1258 phosphoglucomutase from Yersinia pestis KIM
83% identity, 97% coverage

YPTB2923 phosphoglucomutase from Yersinia pseudotuberculosis IP 32953
82% identity, 97% coverage

VP0839 phosphoglucomutase from Vibrio parahaemolyticus RIMD 2210633
71% identity, 100% coverage

N646_2991 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Vibrio alginolyticus NBRC 15630 = ATCC 17749
71% identity, 100% coverage

A0A0H5W931 Phosphoglucomutase from Vibrio cholerae
70% identity, 100% coverage

FORC16_0769 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Vibrio vulnificus
70% identity, 99% coverage

D9T18_08400 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Pseudoalteromonas agarivorans
62% identity, 99% coverage

A0QUA6 Phosphoglucomutase, alpha-D-glucose phosphate-specific from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
MSMEG_2136 phosphoglucomutase, alpha-D-glucose phosphate-specific from Mycobacterium smegmatis str. MC2 155
61% identity, 99% coverage

Q9L117 Phosphoglucomutase from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
SCO7443 phosphoglucomutase from Streptomyces coelicolor A3(2)
61% identity, 98% coverage

Q8NMN0 Phosphoglucomutase from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
cg2800 phosphoglucomutase from Corynebacterium glutamicum ATCC 13032
62% identity, 97% coverage

APA386B_513 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Acetobacter pasteurianus 386B
59% identity, 97% coverage

ACPL_2870 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Actinoplanes sp. SE50/110
60% identity, 100% coverage

SAV_803 phosphoglucomutase from Streptomyces avermitilis MA-4680
59% identity, 97% coverage

SO2336 phosphoglucomutase, alpha-D-glucose phosphate-specific from Shewanella oneidensis MR-1
58% identity, 99% coverage

PP_3578 phosphoglucomutase, alpha-D-glucose phosphate-specific from Pseudomonas putida KT2440
59% identity, 99% coverage

celB / AAA21561.1 phosphoglucomutase from Komagataeibacter xylinus (see paper)
58% identity, 97% coverage

B0W47_02175 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Komagataeibacter nataicola
58% identity, 98% coverage

K3G22_09265 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Shewanella putrefaciens
57% identity, 99% coverage

sll0726 phosphoglucomutase from Synechocystis sp. PCC 6803
59% identity, 95% coverage

nfa44530 putative phosphoglucomutase from Nocardia farcinica IFM 10152
58% identity, 96% coverage

pgmA / I6Y2G3 phosphoglucomutase (EC 5.4.2.2) from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
I6Y2G3 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Mycobacterium tuberculosis (see paper)
NP_217584 phosphoglucomutase PgmA from Mycobacterium tuberculosis H37Rv
Rv3068c phosphoglucomutase from Mycobacterium tuberculosis H37Rv
58% identity, 99% coverage

jk0468 hypothetical protein from Corynebacterium jeikeium K411
57% identity, 98% coverage

PFREUD_10610 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
58% identity, 99% coverage

Q5SLE0 Phosphoglucomutase from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
55% identity, 97% coverage

TTC1630 No description from Thermus thermophilus HB27
55% identity, 97% coverage

B12L_1523 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Bifidobacterium breve 12L
54% identity, 97% coverage

BBMN68_1663 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Bifidobacterium longum subsp. longum BBMN68
54% identity, 97% coverage

Blon_2184 phosphoglucomutase, alpha-D-glucose phosphate-specific from Bifidobacterium longum subsp. infantis ATCC 15697
54% identity, 97% coverage

BL1630 phosphoglucomutase from Bifidobacterium longum NCC2705
54% identity, 97% coverage

BCAL_RS04990 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Bifidobacterium callitrichos DSM 23973
54% identity, 97% coverage

CPA40_RS03335 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Bifidobacterium callitrichos
54% identity, 97% coverage

DR0303 phosphoglucomutase from Deinococcus radiodurans R1
61% identity, 33% coverage

GSU3321 phosphoglucomutase/phosphomannomutase family protein from Geobacter sulfurreducens PCA
31% identity, 88% coverage

VP2488 putative phosphoglucomutase/phosphomannomutase from Vibrio parahaemolyticus RIMD 2210633
27% identity, 88% coverage

TTC0291 No description from Thermus thermophilus HB27
Q5SKJ3 Phosphoglucomutase/phosphomannomutase from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
TTHA0650 putative phosphoglucomutase/phosphomannomutase from Thermus thermophilus HB8
29% identity, 90% coverage

VC0611 phosphoglucomutase/phosphomannomutase, putative from Vibrio cholerae O1 biovar eltor str. N16961
28% identity, 88% coverage

O66791 Phosphoglucomutase/phosphomannomutase from Aquifex aeolicus (strain VF5)
aq_501 phosphoglucomutase/phosphomannomutase from Aquifex aeolicus VF5
27% identity, 90% coverage

all3964 phosphoglucomutase/phosphomannomutase from Nostoc sp. PCC 7120
27% identity, 92% coverage

Ava_1737 Phosphoglucomutase/phosphomannomutase from Anabaena variabilis ATCC 29413
26% identity, 93% coverage

DR_A0047 phospho-sugar mutase, putative from Deinococcus radiodurans R1
28% identity, 88% coverage

FSU_0773 phosphomannomutase from Fibrobacter succinogenes subsp. succinogenes S85
27% identity, 88% coverage

PGMMM_THEKO / Q68BJ6 Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (see paper)
TK1108 phosphohexomutase from Thermococcus kodakaraensis KOD1
25% identity, 92% coverage

FTA_0510 phosphoglucomutase from Francisella tularensis subsp. holarctica FTA
27% identity, 90% coverage

CLIBASIA_05045 phosphoglucomutase from Candidatus Liberibacter asiaticus str. psy62
25% identity, 92% coverage

OFBG_01422 alpha-D-glucose phosphate-specific phosphoglucomutase from Oxalobacter formigenes OXCC13
29% identity, 76% coverage

FTL_RS02540 alpha-D-glucose phosphate-specific phosphoglucomutase from Francisella tularensis subsp. holarctica LVS
27% identity, 90% coverage

K1PQD4 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Magallana gigas
27% identity, 70% coverage

Q16U43 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Aedes aegypti
29% identity, 73% coverage

PGM_DROME / Q9VUY9 Phosphoglucomutase 1; PGM; Glucose phosphomutase; EC 5.4.2.2 from Drosophila melanogaster (Fruit fly) (see 2 papers)
29% identity, 76% coverage

NX02_14005 alpha-D-glucose phosphate-specific phosphoglucomutase from Sphingomonas sanxanigenens DSM 19645 = NX02
30% identity, 72% coverage

CAC2337 Phosphomannomutase from Clostridium acetobutylicum ATCC 824
26% identity, 83% coverage

SSU05_0686 Phosphomannomutase from Streptococcus suis 05ZYH33
26% identity, 87% coverage

PH0923 / O58651 phosphomannose mutase (EC 5.4.2.8) from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see paper)
1wqaA / O58651 Crystal structure of pyrococcus horikoshii phosphomannomutase/phosphoglucomutase complexed with mg2+
O58651 455aa long hypothetical phospho-sugar mutase from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
PH0923 phospho-sugar mutase from Pyrococcus horikoshii OT3
25% identity, 88% coverage

FTT_0414 phosphoglucomutase from Francisella tularensis subsp. tularensis SCHU S4
27% identity, 90% coverage

FTN_0514 phosphoglucomutase from Francisella tularensis subsp. novicida U112
27% identity, 90% coverage

PF0588 phospho-sugar mutase from Pyrococcus furiosus DSM 3638
25% identity, 92% coverage

P93262 Phosphoglucomutase, cytoplasmic from Mesembryanthemum crystallinum
29% identity, 67% coverage

I5AUJ3 Phosphoglucomutase from Eubacterium cellulosolvens (strain ATCC 43171 / JCM 9499 / 6)
28% identity, 89% coverage

PAB0819 PHOSPHOMANNOMUTASE (PMM) from Pyrococcus abyssi GE5
25% identity, 92% coverage

all5089 phosphoglucomutase/phosphomannomutase from Nostoc sp. PCC 7120
25% identity, 90% coverage

GQS78_06950 phosphoglucosamine mutase from Thermococcus bergensis
25% identity, 92% coverage

LGG_00921 phospho-sugar mutase from Lacticaseibacillus rhamnosus GG
LGG_00921 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, II & III from Lactobacillus rhamnosus GG
25% identity, 86% coverage

XP_011070593 phosphoglucomutase, cytoplasmic from Sesamum indicum
29% identity, 67% coverage

PMM0076 Phosphoglucomutase from Prochlorococcus marinus sp. MED4
25% identity, 89% coverage

Mfl120 phosphomannomutase/phosphoglucomutase homolog from Mesoplasma florum L1
27% identity, 94% coverage

Pro0090 Phosphoglucomutase from Prochlorococcus marinus str. SS120
26% identity, 88% coverage

C7W88_RS11010 alpha-D-glucose phosphate-specific phosphoglucomutase from Novosphingobium sp. THN1
28% identity, 88% coverage

Cthe_1265 phospho-sugar mutase from Acetivibrio thermocellus ATCC 27405
Cthe_1265 alpha-phosphoglucomutase from Clostridium thermocellum ATCC 27405
24% identity, 88% coverage

YG2_16120 phospho-sugar mutase from Tetragenococcus halophilus
26% identity, 87% coverage

THA_1027 phosphoglucomutase/phosphomannomutase family protein from Thermosipho africanus TCF52B
25% identity, 88% coverage

LOC110115522 phosphoglucomutase, cytoplasmic from Dendrobium catenatum
28% identity, 67% coverage

7pjcB / A0A1D8PSA9 The structure of candida albicans phosphoglucomutase with isothiazolone modification on cys359
26% identity, 91% coverage

Q99ZH8 Phosphoglucomutase from Streptococcus pyogenes serotype M1
M5005_Spy_0938 phosphoglucomutase/phosphomannomutase from Streptococcus pyogenes MGAS5005
25% identity, 87% coverage

SAMCCGM7_Ch3149 alpha-D-glucose phosphate-specific phosphoglucomutase from Sinorhizobium americanum CCGM7
28% identity, 75% coverage

Ava_2367 Phosphoglucomutase/phosphomannomutase from Anabaena variabilis ATCC 29413
24% identity, 88% coverage

F6HFF7 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Vitis vinifera
27% identity, 62% coverage

PGM2 / P37012 phosphoglucomutase-2 (EC 5.4.2.2) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see 10 papers)
PGM2_YEAST / P37012 Phosphoglucomutase 2; PGM 2; D-glucose-1,6-diphosphate:D-glucose-1-phosphate phosphotransferase; Glucose phosphomutase 2; EC 5.4.2.2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 11 papers)
NP_013823 phosphoglucomutase PGM2 from Saccharomyces cerevisiae S288C
YMR105C Pgm2p from Saccharomyces cerevisiae
26% identity, 89% coverage

BMEI1886 PHOSPHOGLUCOMUTASE from Brucella melitensis 16M
27% identity, 73% coverage

SAK_1155 phosphoglucomutase/phosphomannomutase family protein from Streptococcus agalactiae A909
gbs1100 Unknown from Streptococcus agalactiae NEM316
25% identity, 88% coverage

BCE_5058 phosphoglucomutase/phosphomannomutase family protein from Bacillus cereus ATCC 10987
26% identity, 87% coverage

SMc03925 PROBABLE PHOSPHOGLUCOMUTASE (GLUCOSE PHOSPHOMUTASE) PROTEIN from Sinorhizobium meliloti 1021
Q92M12 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Rhizobium meliloti (strain 1021)
28% identity, 67% coverage

LSEI_0949 phospho-sugar mutase from Lacticaseibacillus paracasei ATCC 334
LSEI_0949 Phosphomannomutase from Lactobacillus casei ATCC 334
26% identity, 86% coverage

PAB1666 PHOSPHO-SUGAR MUTASE from Pyrococcus abyssi GE5
27% identity, 92% coverage

BAS4790 phosphoglucomutase/phosphomannomutase family protein from Bacillus anthracis str. Sterne
26% identity, 87% coverage

BC_4919 phospho-sugar mutase from Bacillus cereus ATCC 14579
26% identity, 87% coverage

Q9M4G4 Phosphoglucomutase, cytoplasmic from Solanum tuberosum
29% identity, 67% coverage

F8U875 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Amorphophallus konjac
26% identity, 73% coverage

PGM1 / P33401 phosphoglucomutase-1 (EC 5.4.2.2) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see 6 papers)
PGM1_YEAST / P33401 Phosphoglucomutase 1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 6 papers)
NP_012795 phosphoglucomutase PGM1 from Saccharomyces cerevisiae S288C
NP_012795, YKL127W Pgm1p from Saccharomyces cerevisiae
27% identity, 86% coverage

E5SQZ6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Trichinella spiralis
25% identity, 77% coverage

Q2YPS4 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Brucella abortus (strain 2308)
BAB1_0055 Phosphoglucomutase/phosphomannomutase:Phosphoglu c omutase/phosphomannomutase C terminal:Phosphoglucomutase/phosphomannomutase ... from Brucella melitensis biovar Abortus 2308
BR0058 phosphoglucomutase from Brucella suis 1330
BAW_10055 alpha-D-glucose phosphate-specific phosphoglucomutase from Brucella abortus
27% identity, 76% coverage

V4W5U2 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Citrus clementina
28% identity, 66% coverage

CMU_003300 phosphoglucomutase-1 protein, putative from Cryptosporidium muris RN66
25% identity, 89% coverage

pgcA / P18159 α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis (strain 168) (see paper)
PGCA_BACSU / P18159 Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis (strain 168) (see 2 papers)
BSU09310 alpha-phosphoglucomutase from Bacillus subtilis subsp. subtilis str. 168
NP_388812 alpha-phosphoglucomutase from Bacillus subtilis subsp. subtilis str. 168
26% identity, 82% coverage

A0A251S377 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Helianthus annuus
28% identity, 67% coverage

T303_05140 phospho-sugar mutase from Streptococcus thermophilus ASCC 1275
26% identity, 86% coverage

pgmA / CAB96418.1 phosphoglucomutase from Streptococcus thermophilus (see paper)
26% identity, 86% coverage

cgd2_3270 phosphoglucomutase, tandemly duplicated gene from Cryptosporidium parvum Iowa II
24% identity, 55% coverage

KLMA_30099 phosphoglucomutase-2 from Kluyveromyces marxianus DMKU3-1042
26% identity, 87% coverage

MSC_0829 phosphoglucomutase or phosphomannomutase from Mycoplasma mycoides subsp. mycoides SC str. PG1
26% identity, 90% coverage

D8I9Z9 Phosphomannomutase phosphoglucomutase from Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000)
25% identity, 84% coverage

AAV49510.1 phosphoglucomutase from Acidithiobacillus ferrooxidans (see paper)
AFE_2324 alpha-D-glucose phosphate-specific phosphoglucomutase from Acidithiobacillus ferrooxidans ATCC 23270
27% identity, 74% coverage

cgd2_3260 phosphoglucomutase, tandemly duplicated gene from Cryptosporidium parvum Iowa II
24% identity, 64% coverage

MMCAP2_0733 phospho-sugar mutase from Mycoplasma mycoides subsp. capri str. GM12
26% identity, 90% coverage

Synpcc7942_0156 phosphoglucomutase from Synechococcus elongatus PCC 7942
26% identity, 90% coverage

W7LNK6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Gibberella moniliformis (strain M3125 / FGSC 7600)
27% identity, 91% coverage

Q9SM60 Phosphoglucomutase, cytoplasmic from Pisum sativum
28% identity, 67% coverage

Q670S5 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Trypanosoma cruzi (see paper)
28% identity, 67% coverage

CD630_27800, CDIF630erm_03043 phospho-sugar mutase from Clostridioides difficile
CD2780 putative phosphomannomutase/phosphoglycerate mutase from Clostridium difficile 630
24% identity, 84% coverage

X276_21930 phospho-sugar mutase from Clostridium beijerinckii NRRL B-598
24% identity, 83% coverage

THTE_3829 phospho-sugar mutase from Thermogutta terrifontis
24% identity, 83% coverage

lp_0764 phosphoglucomutase from Lactobacillus plantarum WCFS1
26% identity, 83% coverage

B9SP64 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Ricinus communis
27% identity, 67% coverage

PMM0278 Phosphotransferase superclass from Prochlorococcus marinus sp. MED4
24% identity, 90% coverage

Q9SGC1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana (see paper)
28% identity, 65% coverage

MAB_3661 Probable phosphomannomutase PmmB from Mycobacterium abscessus ATCC 19977
27% identity, 88% coverage

Q9AUQ4 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Oryza sativa subsp. japonica
XP_015632142 phosphoglucomutase, cytoplasmic 2 from Oryza sativa Japonica Group
28% identity, 67% coverage

AT1G70730 phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative from Arabidopsis thaliana
28% identity, 63% coverage

F4I6W4 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Arabidopsis thaliana
28% identity, 58% coverage

A2CEK3 Phosphoglucomutase 1 from Mus musculus
27% identity, 73% coverage

XP_002527783 phosphoglucomutase, cytoplasmic from Ricinus communis
27% identity, 67% coverage

F1L0Y5 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Ascaris suum
25% identity, 88% coverage

RHOM_RS02235 phospho-sugar mutase from Roseburia hominis A2-183
26% identity, 83% coverage

RL4118 putative phosphoglucomutase from Rhizobium leguminosarum bv. viciae 3841
27% identity, 75% coverage

A0A0D9S732 Phosphoglucomutase 1 from Chlorocebus sabaeus
27% identity, 73% coverage

A6QPB5 PGM1 protein from Bos taurus
27% identity, 77% coverage

CNN00430 phosphoglucomutase from Cryptococcus neoformans var. neoformans JEC21
25% identity, 81% coverage

EF2425 phosphoglucomutase/phosphomannomutase family protein from Enterococcus faecalis V583
24% identity, 84% coverage

P93805 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Zea mays (see paper)
C0PHV6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Zea mays
GRMZM2G023289 phosphoglucomutase, cytoplasmic 2 from Zea mays
27% identity, 67% coverage

G0M2V0 Phosphoglucomutase from Lactiplantibacillus pentosus IG1
26% identity, 83% coverage

HSISS4_01102 phospho-sugar mutase from Streptococcus salivarius
24% identity, 86% coverage

PGMC1_MAIZE / P93804 Phosphoglucomutase, cytoplasmic 1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Zea mays (Maize) (see paper)
P93804 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Zea mays (see paper)
GRMZM2G109383 phosphoglucomutase, cytoplasmic 1 from Zea mays
27% identity, 67% coverage

Q8VX48 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (Fragment) from Triticum aestivum
27% identity, 67% coverage

J9W313 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
26% identity, 81% coverage

D500_0478 phospho-sugar mutase from Mycoplasma feriruminatoris
25% identity, 86% coverage

Q9SNX2 Phosphoglucomutase, cytoplasmic from Bromus inermis
27% identity, 67% coverage

O49299 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana (see paper)
AT1G23190 phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative from Arabidopsis thaliana
27% identity, 66% coverage

SiRe_1800 phosphoglucosamine mutase from Sulfolobus islandicus REY15A
23% identity, 92% coverage

FAD_0602 phosphoglucosamine mutase from Ferroplasma acidiphilum
24% identity, 89% coverage

6snoA / P36871 Crystal structures of human pgm1 isoform 2 (see paper)
26% identity, 73% coverage

Q6S3D6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Populus tomentosa
27% identity, 66% coverage

Q9ZSQ4 Phosphoglucomutase, cytoplasmic from Populus tremula
26% identity, 66% coverage

Cbei_0983 phosphoglucomutase/phosphomannomutase alpha/beta/subunit from Clostridium beijerincki NCIMB 8052
24% identity, 83% coverage

BQ10790 Phosphoglucomutase from Bartonella quintana str. Toulouse
27% identity, 84% coverage

XP_002466576 phosphoglucomutase, cytoplasmic 2 from Sorghum bicolor
26% identity, 63% coverage

GNI_111250 cytoplasmic phosphoglucomutase from Gregarina niphandrodes
25% identity, 73% coverage

LSA0521 Phosphoglucomutase from Lactobacillus sakei subsp. sakei 23K
25% identity, 84% coverage

SYNPCC7002_A1492 phosphoglucomutase/phosphomannomutase from Synechococcus sp. PCC 7002
24% identity, 89% coverage

Atu4074 phosphoglucomutase from Agrobacterium tumefaciens str. C58 (Cereon)
ATU_RS19035 alpha-D-glucose phosphate-specific phosphoglucomutase from Agrobacterium fabrum str. C58
26% identity, 75% coverage

Q9D0F9 Phosphoglucomutase-1 from Mus musculus
NP_082408 phosphoglucomutase-1 from Mus musculus
28% identity, 67% coverage

F6X8Q2 Phosphoglucomutase-1 from Equus caballus
27% identity, 64% coverage

Q2UZR2 Phosphoglucomutase-1 from Gallus gallus
26% identity, 75% coverage

D8T2E8 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Selaginella moellendorffii
26% identity, 70% coverage

F1NN63 Phosphoglucomutase-1 from Gallus gallus
26% identity, 80% coverage

lmo0865 similar to phosphomannomutase from Listeria monocytogenes EGD-e
24% identity, 92% coverage

U3J383 Phosphoglucomutase-1 from Anas platyrhynchos platyrhynchos
27% identity, 67% coverage

A0A4W2F139 Phosphoglucomutase-1 from Bos indicus x Bos taurus
26% identity, 76% coverage

HAPS_0849 phospho-sugar mutase from Glaesserella parasuis SH0165
HAPS_0849 phosphomannomutase from Haemophilus parasuis SH0165
25% identity, 87% coverage

PGM1_RABIT / P00949 Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus (Rabbit) (see 3 papers)
28% identity, 67% coverage

PGM5_MOUSE / Q8BZF8 Phosphoglucomutase-like protein 5 from Mus musculus (Mouse) (see paper)
NP_778178 phosphoglucomutase-like protein 5 from Mus musculus
25% identity, 69% coverage

W5PUA9 Phosphoglucomutase-like protein 5 from Ovis aries
25% identity, 69% coverage

BT1548 phosphoglucomutase phosphomannomutase from Bacteroides thetaiotaomicron VPI-5482
26% identity, 83% coverage

PGM5_HUMAN / Q15124 Phosphoglucomutase-like protein 5; Aciculin; Phosphoglucomutase-related protein; PGM-RP from Homo sapiens (Human) (see 2 papers)
25% identity, 69% coverage

Synpcc7942_1268 Phosphoglucomutase from Synechococcus elongatus PCC 7942
27% identity, 88% coverage

Q4R5E4 Phosphoglucomutase-1 from Macaca fascicularis
27% identity, 67% coverage

PH1210 phospho-sugar mutase from Pyrococcus horikoshii OT3
25% identity, 92% coverage

6y8yA / A0A6P3VN15 Structure of baltic herring (clupea harengus) phosphoglucomutase 5 (pgm5) with bound glucose-1-phosphate (see paper)
26% identity, 73% coverage

W5PJB6 Phosphoglucomutase-1 from Ovis aries
27% identity, 63% coverage

F1S814 Phosphoglucomutase-1 from Sus scrofa
27% identity, 63% coverage

Aflv_2333 Phosphomannomutase from Anoxybacillus flavithermus WK1
24% identity, 82% coverage

Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I from Clostridium cellulolyticum H10
Ccel_1417 phospho-sugar mutase from Ruminiclostridium cellulolyticum H10
24% identity, 84% coverage

THA_RS09865 phospho-sugar mutase from Thermosipho africanus TCF52B
27% identity, 72% coverage

TDE1998 phosphohexose mutase family protein from Treponema denticola ATCC 35405
25% identity, 86% coverage

E3K5I5 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL)
26% identity, 76% coverage

Q08DP0 Phosphoglucomutase-1 from Bos taurus
26% identity, 76% coverage

SMU_RS04965 phospho-sugar mutase from Streptococcus mutans UA159
23% identity, 84% coverage

cce_0770 phosphoglucomutase/phosphomannomutase from Cyanothece sp. ATCC 51142
25% identity, 89% coverage

MAP3430 PmmB from Mycobacterium avium subsp. paratuberculosis str. k10
27% identity, 88% coverage

SSA_1204 Phosphoglucomutase from Streptococcus sanguinis SK36
23% identity, 84% coverage

MAG4650 Phosphomannomutase from Mycoplasma agalactiae PG2
24% identity, 89% coverage

Q3U6X6 Phosphoglucomutase-1 from Mus musculus
28% identity, 67% coverage

BB0835 phosphomannomutase (cpsG) from Borrelia burgdorferi B31
22% identity, 86% coverage

XP_001875148 phosphoglucomutase from Laccaria bicolor S238N-H82
26% identity, 81% coverage

PPE_04441 phospho-sugar mutase from Paenibacillus polymyxa E681
25% identity, 84% coverage

PGM5_RAT / D3ZVR9 Phosphoglucomutase-like protein 5 from Rattus norvegicus (Rat) (see paper)
25% identity, 70% coverage

MAGa5120 phosphomannomutase from Mycoplasma agalactiae
24% identity, 89% coverage

A1A5L2 Phosphoglucomutase-1 (Fragment) from Rattus norvegicus
27% identity, 64% coverage

NBX27_00660 phosphoglucosamine mutase from Erysipelothrix rhusiopathiae
25% identity, 88% coverage

1kfqA / P47244 Crystal structure of exocytosis-sensitive phosphoprotein, pp63/parafusin (phosphoglucomutse) from paramecium. Open form (see paper)
25% identity, 74% coverage

B5DG72 Phosphoglucomutase-1 from Salmo salar
26% identity, 86% coverage

PGM1_PARTE / P47244 Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; Parafusin; Pf; pp63; EC 5.4.2.2 from Paramecium tetraurelia (see paper)
25% identity, 73% coverage

RD1_2870 phosphoglucomutase from Roseobacter denitrificans OCh 114
27% identity, 91% coverage

Saci_0806 phosphoglucomutase/phosphomannomutase from Sulfolobus acidocaldarius DSM 639
24% identity, 90% coverage

TRIVIDRAFT_87728 uncharacterized protein from Trichoderma virens Gv29-8
26% identity, 89% coverage

PGM1_RAT / P38652 Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Rattus norvegicus (Rat) (see paper)
27% identity, 67% coverage

PGM1 / P36871 phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens (see 3 papers)
PGM1_HUMAN / P36871 Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens (Human) (see 8 papers)
P36871 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens (see 4 papers)
NP_002624 phosphoglucomutase-1 isoform 1 from Homo sapiens
27% identity, 67% coverage

Q10DZ9 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Oryza sativa subsp. japonica
28% identity, 60% coverage

UAC_01121 phospho-sugar mutase from Enterococcus mundtii ATCC 882
26% identity, 83% coverage

CMU_003310 phosphoglucomutase/phosphomannomutase, C-terminal domain-containing protein from Cryptosporidium muris RN66
25% identity, 53% coverage

PGM_ENTH1 / O15820 Phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM) (see paper)
EHI_110120 phosphoglucomutase from Entamoeba histolytica HM-1:IMSS
25% identity, 74% coverage

AFUA_3G11830 phosphoglucomutase PgmA from Aspergillus fumigatus Af293
B0XXA2 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Aspergillus fumigatus (strain CBS 144.89 / FGSC A1163 / CEA10)
25% identity, 88% coverage

A0A2H5BEG8 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Ganoderma lucidum (see paper)
26% identity, 80% coverage

7p5oB / Q4WY53 Crystal structure of aspergillus fumigatus phosphoglucomutase in complex with the reaction intermediate
25% identity, 87% coverage

A8N8Z1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Coprinopsis cinerea (see paper)
26% identity, 78% coverage

Q980S1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus (see paper)
SSO0207 Phosphomannomutase (pmM) from Sulfolobus solfataricus P2
SSO0207 phosphoglucosamine mutase from Saccharolobus solfataricus P2
22% identity, 92% coverage

PmVP161_0089 phospho-sugar mutase from Pasteurella multocida
25% identity, 87% coverage

NCU10058 phosphoglucomutase 2 from Neurospora crassa OR74A
25% identity, 90% coverage

B4DFP1 Phosphoglucomutase-1 from Homo sapiens
27% identity, 69% coverage

XP_003592358 phosphoglucomutase, chloroplastic from Medicago truncatula
24% identity, 62% coverage

Q4QCF1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Leishmania major (see paper)
26% identity, 86% coverage

CCA00344 phosphoglucomutase/phosphomannomutase family protein from Chlamydophila caviae GPIC
24% identity, 76% coverage

G0Z3A1 Phosphoglucomutase-1 from Sus scrofa
26% identity, 69% coverage

LOC110729741 phosphoglucomutase, chloroplastic-like from Chenopodium quinoa
24% identity, 69% coverage

XP_027103885 phosphoglucomutase, chloroplastic-like from Coffea arabica
25% identity, 61% coverage

SM12261_RS05265 phospho-sugar mutase from Streptococcus mitis NCTC 12261
24% identity, 84% coverage

FD735_RS05500 phospho-sugar mutase from Streptococcus sp. 1643
23% identity, 86% coverage

SGO_1215 phosphomannomutase from Streptococcus gordonii str. Challis substr. CH1
23% identity, 84% coverage

PGM_EMENI / Q9P931 Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) (see paper)
pgmB phosphoglucomutase; EC 5.4.2.2 from Emericella nidulans (see paper)
25% identity, 91% coverage

7s0wB / P36871 Crystal structure of the t337m variant of human pgm-1 (see paper)
28% identity, 66% coverage

4qg5A / Q4QCF1 Crystal structure of phosphoglucomutase from leishmania major at 3.5 angstrom resolution
26% identity, 82% coverage

HMPREF8579_1344 phospho-sugar mutase from Streptococcus oralis ATCC 35037
23% identity, 84% coverage

ZP_01818094 phosphoglucomutase/phosphomannomutase family protein from Streptococcus pneumoniae SP3-BS71
23% identity, 84% coverage

PGM_SCHPO / O74374 Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
SPBC32F12.10 phosphoglucomutase (predicted) from Schizosaccharomyces pombe
27% identity, 70% coverage

Q9RP94 Phosphoglucomutase from Streptococcus pneumoniae
23% identity, 84% coverage

B7GE51 UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase from Phaeodactylum tricornutum (strain CCAP 1055/1)
27% identity, 37% coverage

spr1351 Phosphoglucomutase from Streptococcus pneumoniae R6
SP_1498 phosphoglucomutase from Streptococcus pneumoniae TIGR4
SPD_1326 phosphoglucomutase/phosphomannomutase family protein from Streptococcus pneumoniae D39
23% identity, 84% coverage

LBA0687 phosphoglucomutase from Lactobacillus acidophilus NCFM
24% identity, 84% coverage

SCO4916 phosphomannomutase from Streptomyces coelicolor A3(2)
25% identity, 88% coverage

NCLIV_014450 Phosphoglucomutase 2, related from Neospora caninum Liverpool
23% identity, 53% coverage

XP_004234144 phosphoglucomutase, chloroplastic from Solanum lycopersicum
25% identity, 62% coverage

XP_021616975 phosphoglucomutase, chloroplastic isoform X2 from Manihot esculenta
24% identity, 63% coverage

SAK_0594 phosphoglucomutase/phosphomannomutase family protein from Streptococcus agalactiae A909
25% identity, 85% coverage

XP_009107139 phosphoglucomutase, chloroplastic isoform X2 from Brassica rapa
25% identity, 62% coverage

Rv3308 PROBABLE PHOSPHOMANNOMUTASE PMMB (PHOSPHOMANNOSE MUTASE) from Mycobacterium tuberculosis H37Rv
27% identity, 92% coverage

D7T1T9 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) from Vitis vinifera
25% identity, 81% coverage

SAV_3343 phosphomannomutase from Streptomyces avermitilis MA-4680
25% identity, 88% coverage

New Search

For advice on how to use these tools together, see Interactive tools for functional annotation of bacterial genomes.

Statistics

The PaperBLAST database links 789,361 different protein sequences to 1,256,019 scientific articles. Searches against EuropePMC were last performed on January 10 2025.

How It Works

PaperBLAST builds a database of protein sequences that are linked to scientific articles. These links come from automated text searches against the articles in EuropePMC and from manually-curated information from GeneRIF, UniProtKB/Swiss-Prot, BRENDA, CAZy (as made available by dbCAN), BioLiP, CharProtDB, MetaCyc, EcoCyc, TCDB, REBASE, the Fitness Browser, and a subset of the European Nucleotide Archive with the /experiment tag. Given this database and a protein sequence query, PaperBLAST uses protein-protein BLAST to find similar sequences with E < 0.001.

To build the database, we query EuropePMC with locus tags, with RefSeq protein identifiers, and with UniProt accessions. We obtain the locus tags from RefSeq or from MicrobesOnline. We use queries of the form "locus_tag AND genus_name" to try to ensure that the paper is actually discussing that gene. Because EuropePMC indexes most recent biomedical papers, even if they are not open access, some of the links may be to papers that you cannot read or that our computers cannot read. We query each of these identifiers that appears in the open access part of EuropePMC, as well as every locus tag that appears in the 500 most-referenced genomes, so that a gene may appear in the PaperBLAST results even though none of the papers that mention it are open access. We also incorporate text-mined links from EuropePMC that link open access articles to UniProt or RefSeq identifiers. (This yields some additional links because EuropePMC uses different heuristics for their text mining than we do.)

For every article that mentions a locus tag, a RefSeq protein identifier, or a UniProt accession, we try to select one or two snippets of text that refer to the protein. If we cannot get access to the full text, we try to select a snippet from the abstract, but unfortunately, unique identifiers such as locus tags are rarely provided in abstracts.

PaperBLAST also incorporates manually-curated protein functions:

Except for GeneRIF and ENA, the curated entries include a short curated description of the protein's function. For entries from BioLiP, the protein's function may not be known beyond binding to the ligand. Many of these entries also link to articles in PubMed.

For more information see the PaperBLAST paper (mSystems 2017) or the code. You can download PaperBLAST's database here.

Changes to PaperBLAST since the paper was written:

Many of these changes are described in Interactive tools for functional annotation of bacterial genomes.

Secrets

PaperBLAST cannot provide snippets for many of the papers that are published in non-open-access journals. This limitation applies even if the paper is marked as "free" on the publisher's web site and is available in PubmedCentral or EuropePMC. If a journal that you publish in is marked as "secret," please consider publishing elsewhere.

Omissions from the PaperBLAST Database

Many important articles are missing from PaperBLAST, either because the article's full text is not in EuropePMC (as for many older articles), or because the paper does not mention a protein identifier such as a locus tag, or because of PaperBLAST's heuristics. If you notice an article that characterizes a protein's function but is missing from PaperBLAST, please notify the curators at UniProt or add an entry to GeneRIF. Entries in either of these databases will eventually be incorporated into PaperBLAST. Note that to add an entry to UniProt, you will need to find the UniProt identifier for the protein. If the protein is not already in UniProt, you can ask them to create an entry. To add an entry to GeneRIF, you will need an NCBI Gene identifier, but unfortunately many prokaryotic proteins in RefSeq do not have corresponding Gene identifers.

References

PaperBLAST: Text-mining papers for information about homologs.
M. N. Price and A. P. Arkin (2017). mSystems, 10.1128/mSystems.00039-17.

Europe PMC in 2017.
M. Levchenko et al (2017). Nucleic Acids Research, 10.1093/nar/gkx1005.

Gene indexing: characterization and analysis of NLM's GeneRIFs.
J. A. Mitchell et al (2003). AMIA Annu Symp Proc 2003:460-464.

UniProt: the universal protein knowledgebase.
The UniProt Consortium (2016). Nucleic Acids Research, 10.1093/nar/gkw1099.

BRENDA in 2017: new perspectives and new tools in BRENDA.
S. Placzek et al (2017). Nucleic Acids Research, 10.1093/nar/gkw952.

The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.
I. M. Keeseler et al (2016). Nucleic Acids Research, 10.1093/nar/gkw1003.

The MetaCyc database of metabolic pathways and enzymes.
R. Caspi et al (2018). Nucleic Acids Research, 10.1093/nar/gkx935.

CharProtDB: a database of experimentally characterized protein annotations.
R. Madupu et al (2012). Nucleic Acids Research, 10.1093/nar/gkr1133.

The carbohydrate-active enzymes database (CAZy) in 2013.
V. Lombard et al (2014). Nucleic Acids Research, 10.1093/nar/gkt1178.

The Transporter Classification Database (TCDB): recent advances
M. H. Saier, Jr. et al (2016). Nucleic Acids Research, 10.1093/nar/gkv1103.

REBASE - a database for DNA restriction and modification: enzymes, genes and genomes.
R. J. Roberts et al (2015). Nucleic Acids Research, 10.1093/nar/gku1046.

Deep annotation of protein function across diverse bacteria from mutant phenotypes.
M. N. Price et al (2016). bioRxiv, 10.1101/072470.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory