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PaperBLAST

PaperBLAST Hits for TCDB::P46333 Probable metabolite transport protein CsbC (Bacillus subtilis (strain 168)) (461 a.a., MKKDTRKYMI...)

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Found 252 similar proteins in the literature:

TC 2.A.1.1.106 / P46333 Probable metabolite transport protein CsbC from Bacillus subtilis (strain 168) (see 3 papers)
100% identity, 100% coverage

BSU35830 putative carbohydrate transporter from Bacillus subtilis subsp. subtilis str. 168
50% identity, 98% coverage

SE0247 bicyclomycin resistance protein TcaB from Staphylococcus epidermidis ATCC 12228
54% identity, 95% coverage

GLCP_STAES / A0A0H2VG78 Glucose transporter GlcP; Glucose/H(+) symporter from Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) (see paper)
SERP_RS11465 sugar porter family MFS transporter from Staphylococcus epidermidis RP62A
54% identity, 95% coverage

DV527_RS12535 sugar porter family MFS transporter from Staphylococcus saprophyticus
55% identity, 96% coverage

DV527_RS02780 sugar porter family MFS transporter from Staphylococcus saprophyticus
53% identity, 98% coverage

XYLT_LEVBR / O52733 D-xylose transporter; D-xylose-proton symporter from Levilactobacillus brevis (Lactobacillus brevis) (see paper)
TC 2.A.1.1.41 / O52733 The D-xylose:H+ symporter, XylT (Km=220 μM; inhibited competitively by 6-deoxyglucose (Ki=220 μM), but not by other sugars tested) from Lactobacillus brevis
48% identity, 96% coverage

Cbei_0109 sugar transporter from Clostridium beijerincki NCIMB 8052
45% identity, 97% coverage

X276_26120 sugar porter family MFS transporter from Clostridium beijerinckii NRRL B-598
45% identity, 97% coverage

LLKF_1623 D-xylose-proton symporter from Lactococcus lactis subsp. lactis KF147
47% identity, 97% coverage

HAH_5129 sugar porter family MFS transporter from Haloarcula hispanica ATCC 33960
43% identity, 97% coverage

E4NW64 MFS transporter, sugar porter family from Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / KCTC 4070 / PR3)
45% identity, 92% coverage

LEUM_0128 D-xylose proton-symporter from Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
41% identity, 92% coverage

DB43_AL00090 sugar porter family MFS transporter from Parachlamydia acanthamoebae
43% identity, 94% coverage

LEGAS_1062 sugar porter family MFS transporter from Leuconostoc gasicomitatum LMG 18811
41% identity, 92% coverage

XNR_0140 sugar porter family MFS transporter from Streptomyces albidoflavus
41% identity, 95% coverage

LEUM_0853 D-xylose proton-symporter from Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
42% identity, 95% coverage

F9ULF8 Myo-inositol (And similar sugars) transporter,major facilitator superfamily (MFS) from Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
40% identity, 94% coverage

TC 2.A.1.1.116 / C4B4V9 Arabinose/xylose transporter, AraE from Corynebacterium glutamicum
41% identity, 92% coverage

Cbei_4545 sugar transporter from Clostridium beijerincki NCIMB 8052
39% identity, 96% coverage

Lreu_0479 sugar porter family MFS transporter from Limosilactobacillus reuteri subsp. reuteri
Lreu_0479 sugar transporter from Lactobacillus reuteri DSM 20016
39% identity, 96% coverage

CAC1345 D-xylose-proton symporter from Clostridium acetobutylicum ATCC 824
CA_C1345 sugar porter family MFS transporter from Clostridium acetobutylicum ATCC 824
39% identity, 98% coverage

P54723 Putative metabolite transport protein YfiG from Bacillus subtilis (strain 168)
37% identity, 92% coverage

IOLT_BACSU / O34718 Major myo-inositol transporter IolT from Bacillus subtilis (strain 168) (see paper)
TC 2.A.1.1.26 / O34718 Major myoinositol:H+ symporter, IolT from Bacillus subtilis (see 3 papers)
37% identity, 93% coverage

SXYL_00126 sugar porter family MFS transporter from Staphylococcus xylosus
40% identity, 94% coverage

HGB56_08960 sugar porter family MFS transporter from Lactiplantibacillus plantarum
41% identity, 92% coverage

TC 2.A.1.1.42 / Q8G3X1 The D-glucose:H+ symporter, GlcP (glucose uptake is inhibited by 2-deoxyglucose, mannose and galactose) from Bifidobacterium longum (see paper)
BL1631 D-Glucose-proton symporter from Bifidobacterium longum NCC2705
41% identity, 84% coverage

BBMN68_1664 sugar porter family MFS transporter from Bifidobacterium longum subsp. longum BBMN68
41% identity, 84% coverage

CTK_C04350 sugar porter family MFS transporter from Clostridium tyrobutyricum
38% identity, 95% coverage

F7308_1395 sugar porter family MFS transporter from Francisella salina
37% identity, 93% coverage

PPYC1_19055 sugar porter family MFS transporter from Paenibacillus polymyxa
39% identity, 91% coverage

TC 2.A.1.1.53 / Q8NTX0 Myo-Inositol uptake porter, IolT1 (Km=0.2mM) from Corynebacterium glutamicum (Brevibacterium flavum) (see paper)
NCgl0178 sugar porter family MFS transporter from Corynebacterium glutamicum ATCC 13032
cg0223 metabolite transport protein from Corynebacterium glutamicum ATCC 13032
36% identity, 90% coverage

AFE_2312, AFE_RS10630 sugar porter family MFS transporter from Acidithiobacillus ferrooxidans ATCC 23270
38% identity, 95% coverage

ETAE_2966 sugar transporter from Edwardsiella tarda EIB202
37% identity, 91% coverage

lpp0488 hypothetical protein from Legionella pneumophila str. Paris
38% identity, 95% coverage

lpg0421 D-xylose (galactose, arabinose)-proton symporter from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
38% identity, 95% coverage

APA386B_1333 sugar porter family MFS transporter from Acetobacter pasteurianus 386B
36% identity, 89% coverage

CH1034_220103 sugar porter family MFS transporter from Klebsiella pneumoniae
36% identity, 94% coverage

CAC1339 Possible sugar-proton symporter from Clostridium acetobutylicum ATCC 824
CA_C1339 sugar porter family MFS transporter from Clostridium acetobutylicum ATCC 824
36% identity, 96% coverage

C5965_09300 sugar porter family MFS transporter from Cronobacter sakazakii
37% identity, 98% coverage

D9T18_05400 sugar porter family MFS transporter from Pseudoalteromonas agarivorans
34% identity, 89% coverage

XAC1777 MFS transporter from Xanthomonas axonopodis pv. citri str. 306
34% identity, 88% coverage

INT1_ARATH / Q8VZR6 Inositol transporter 1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
TC 2.A.1.1.66 / Q8VZR6 The tonoplast H+:Inositol symporter 1, Int1 (mediates efflux from the tonoplast to the cytoplasm (Schneider et al., 2008) (most similar to 2.A.1.1.63 and 2.A.1.1.62) from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
int1 / CAJ00303.1 inositol transporter 1 from Arabidopsis thaliana (see paper)
AT2G43330 INT1 (INOSITOL TRANSPORTER 1); carbohydrate transmembrane transporter/ myo-inositol:hydrogen symporter/ sugar:hydrogen symporter from Arabidopsis thaliana
NP_850393 inositol transporter 1 from Arabidopsis thaliana
37% identity, 84% coverage

ZMO0293 sugar transporter from Zymomonas mobilis subsp. mobilis ZM4
ZMO_RS01265 sugar porter family MFS transporter from Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
37% identity, 89% coverage

YE2639 putative transporter protein from Yersinia enterocolitica subsp. enterocolitica 8081
36% identity, 95% coverage

XOO_2760 MFS transporter from Xanthomonas oryzae pv. oryzae MAFF 311018
34% identity, 89% coverage

orf9 major facilitator superfamily permease-possibl y sugar transporter from Gramella forsetii KT0803
36% identity, 91% coverage

AT4G36670 mannitol transporter, putative from Arabidopsis thaliana
35% identity, 88% coverage

XP_002313809 polyol transporter 5 from Populus trichocarpa
32% identity, 86% coverage

AL01_02185 sugar porter family MFS transporter from Bombella intestini
36% identity, 92% coverage

CgS9114_04075 sugar porter family MFS transporter from Corynebacterium glutamicum S9114
35% identity, 88% coverage

b2943 galactose:H+ symporter (galP) from Escherichia coli BW25113
GalP / b2943 galactose:H+ symporter from Escherichia coli K-12 substr. MG1655 (see 6 papers)
GalP / P0AEP1 galactose:H+ symporter from Escherichia coli (strain K12) (see 7 papers)
GALP_ECOLI / P0AEP1 Galactose-proton symporter; Galactose transporter from Escherichia coli (strain K12) (see paper)
TC 2.A.1.1.1 / P0AEP1 Galactose:H+ symporter, GalP. Also transports glucose, xylose, fucose (6-deoxygalactose), 2-deoxygalactose and 2-deoxyglucose) (Henderson and Giddens 1977; from Escherichia coli (strain K12)
NP_417418 galactose:H(+) symporter from Escherichia coli str. K-12 substr. MG1655
b2943 D-galactose transporter from Escherichia coli str. K-12 substr. MG1655
DK885_04375, ETEC_3133 galactose/proton symporter from Escherichia coli
37% identity, 97% coverage

PFREUD_19110 MFS transporter from Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
35% identity, 81% coverage

STM14_3735 galactose/proton symporter from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
37% identity, 97% coverage

ZPR_0446 xylose permease from Zunongwangia profunda SM-A87
36% identity, 92% coverage

GOX0649 Sugar-proton symporter from Gluconobacter oxydans 621H
35% identity, 91% coverage

TC 2.A.1.1.54 / Q8NL90 Myo-Inositol (Km=0.45mM) uptake porter, IolT2 (Krings et al., 2006).  Can not transport D-glucose from Corynebacterium glutamicum (Brevibacterium flavum) (see paper)
cg3387 major facilitator superfamily permease from Corynebacterium glutamicum ATCC 13032
NCgl2953 sugar porter family MFS transporter from Corynebacterium glutamicum ATCC 13032
34% identity, 88% coverage

GOX1971 Galactose-proton symporter from Gluconobacter oxydans 621H
35% identity, 94% coverage

Z4288 galactose-proton symport of transport system from Escherichia coli O157:H7 EDL933
ECs3819 galactose-proton symport of transport system from Escherichia coli O157:H7 str. Sakai
38% identity, 95% coverage

XP_021757156 plastidic glucose transporter 4-like from Chenopodium quinoa
36% identity, 78% coverage

AL01_03450 sugar porter family MFS transporter from Bombella intestini
35% identity, 94% coverage

NP_708708 MFS family galactose:proton symporter from Shigella flexneri 2a str. 301
37% identity, 96% coverage

RM25_RS08970 MFS transporter from Propionibacterium freudenreichii subsp. freudenreichii
35% identity, 81% coverage

ARAE_BACSU / P96710 Arabinose-proton symporter; Arabinose transporter from Bacillus subtilis (strain 168) (see 4 papers)
TC 2.A.1.1.55 / P96710 L-arabinose:proton symporter, AraE (Sa-Nogueira and Ramos, 1997). Also transports xylose, galactose and α-1,5 arabinobiose from Bacillus subtilis (see 4 papers)
36% identity, 91% coverage

AT2G20780 mannitol transporter, putative from Arabidopsis thaliana
33% identity, 85% coverage

B0W47_14370 sugar porter family MFS transporter from Komagataeibacter nataicola
37% identity, 93% coverage

pGlcT / Q56ZZ7 glucose transporter from Arabidopsis thaliana (see 4 papers)
PLST4_ARATH / Q56ZZ7 Plastidic glucose transporter 4; AtpGlcT from Arabidopsis thaliana (Mouse-ear cress) (see paper)
TC 2.A.1.1.102 / Q56ZZ7 Plastidic glucose transporter 4 (AtpGlcT) from Arabidopsis thaliana (see 5 papers)
NP_850828 plastidic GLC translocator from Arabidopsis thaliana
AT5G16150 PGLCT (PLASTIDIC GLC TRANSLOCATOR); carbohydrate transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
36% identity, 78% coverage

LGG_02683 D-xylose proton-symporter / bicyclomycin resistance protein TcaB / metabolite transport protein CsbC from Lactobacillus rhamnosus GG
37% identity, 95% coverage

LOC100852699 polyol transporter 5 from Vitis vinifera
33% identity, 86% coverage

plt2 / CAD58710.1 polyol transporter from Plantago major (see paper)
32% identity, 83% coverage

MSMEG_5559 metabolite/sugar transport protein from Mycobacterium smegmatis str. MC2 155
34% identity, 93% coverage

AT2G18480 mannitol transporter, putative from Arabidopsis thaliana
35% identity, 82% coverage

LOC4349512 D-xylose-proton symporter-like 2 from Oryza sativa Japonica Group
35% identity, 86% coverage

Npun_R5323 sugar transporter from Nostoc punctiforme
33% identity, 94% coverage

BT_0794 D-xylose transporter XylE from Bacteroides thetaiotaomicron VPI-5482
BT0794 D-xylose-proton symporter (D-xylose transporter) from Bacteroides thetaiotaomicron VPI-5482
34% identity, 90% coverage

Q9LLE0 Hexose transporter (Fragment) from Solanum tuberosum
36% identity, 91% coverage

XylE / b4031 D-xylose:H+ symporter from Escherichia coli K-12 substr. MG1655 (see 7 papers)
xylE / P0AGF4 D-xylose:H+ symporter from Escherichia coli (strain K12) (see 8 papers)
XYLE_ECOLI / P0AGF4 D-xylose-proton symporter; D-xylose transporter from Escherichia coli (strain K12) (see paper)
TC 2.A.1.1.3 / P0AGF4 Xylose (xylopyranose):H+ symporter of 491 aas and 12 TMSs from Escherichia coli (see 7 papers)
xylE D-xylose-proton symporter from Escherichia coli K12 (see 7 papers)
NP_418455 D-xylose:H(+) symporter from Escherichia coli str. K-12 substr. MG1655
b4031 D-xylose transporter from Escherichia coli str. K-12 substr. MG1655
EcolC_3998 sugar transporter from Escherichia coli C str. ATCC 8739
34% identity, 89% coverage

TC 2.A.1.1.122 / AGG19156.1 Sorbitol (glucitol):H+ co-transporter, SOT2 (Km for sorbitol of 0.81 mM) of 491 aas and 12 TMSs (Gao et al. 2003). SOT2 of Prunus cerasus is mainly expressed only early in fruit development and not in leaves from Pyrus pyrifolia
34% identity, 90% coverage

Fisuc_1804 sugar transporter from Fibrobacter succinogenes subsp. succinogenes S85
33% identity, 92% coverage

FTN_1079 sugar porter (SP) family from Francisella tularensis subsp. novicida U112
35% identity, 94% coverage

plt1 / CAD58709.1 polyol transporter from Plantago major (see paper)
31% identity, 86% coverage

EcolC_0874 sugar transporter from Escherichia coli C str. ATCC 8739
34% identity, 93% coverage

AraE / b2841 arabinose:H+ symporter from Escherichia coli K-12 substr. MG1655 (see 5 papers)
araE / P0AE24 arabinose:H+ symporter from Escherichia coli (strain K12) (see 5 papers)
ARAE_ECOLI / P0AE24 Arabinose-proton symporter; Arabinose transporter from Escherichia coli (strain K12) (see 4 papers)
TC 2.A.1.1.2 / P0AE24 Arabinose (xylose; galactose):H+ symporter, AraE (low affinity high capacity) from Escherichia coli (see 6 papers)
b2841 arabinose transporter from Escherichia coli str. K-12 substr. MG1655
34% identity, 93% coverage

DR76_1762 arabinose-proton symporter AraE from Escherichia coli ATCC 25922
34% identity, 93% coverage

S3049 low-affinity L-arabinose transport system proton symport protein from Shigella flexneri 2a str. 2457T
34% identity, 93% coverage

TC 2.A.1.1.79 / Q1XF07 Polyol (xylitol):H+ symporter, PLT4 from Lotus japonicus
31% identity, 88% coverage

CCNA_00857 D-xylose transporter from Caulobacter crescentus NA1000
32% identity, 92% coverage

CC0814 major facilitator family transporter from Caulobacter crescentus CB15
32% identity, 84% coverage

XP_001387138 sugar transporter, putative from Scheffersomyces stipitis CBS 6054
A3GHU5 Sugar transporter, putative from Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
35% identity, 80% coverage

4gbyA / P0AGF4 The structure of the mfs (major facilitator superfamily) proton:xylose symporter xyle bound to d-xylose (see paper)
34% identity, 89% coverage

STM4418 sugar (and other) transporter from Salmonella typhimurium LT2
32% identity, 93% coverage

FTN_0687 galactose-proton symporter, major facilitator superfamily (MFS) transport protein from Francisella tularensis subsp. novicida U112
34% identity, 93% coverage

AT5G17010, NP_850835 sugar transporter family protein from Arabidopsis thaliana
Q6AWX0 D-xylose-proton symporter-like 2 from Arabidopsis thaliana
36% identity, 85% coverage

PLT5_ARATH / Q8VZ80 Polyol transporter 5; Protein POLYOL TRANSPORTER 5; AtPLT5; Sugar-proton symporter PLT5 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
TC 2.A.1.1.34 / Q8VZ80 The broad specificity sugar/sugar alcohol (myo-inositol, glycerol, ribose, sorbitol, mannitol, xylitol, erythritol, etc) H+ symporter, AtPLT5 (transports a wide range of hexoses, pentoses, tetroses, sugar alcohols and a sugar acid, but not disaccharides) (Reinders et al., 2005) (expressed in roots, leaves and floral organs) from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
PLT5 / RF|NP_188513.1 polyol transporter 5 from Arabidopsis thaliana (see paper)
NP_188513 polyol/monosaccharide transporter 5 from Arabidopsis thaliana
AT3G18830 ATPLT5 (POLYOL TRANSPORTER 5); D-ribose transmembrane transporter/ D-xylose transmembrane transporter/ carbohydrate transmembrane transporter/ galactose transmembrane transporter/ glucose transmembrane transporter/ glycerol transmembrane transporter/ mannitol transmembrane transporter/ monosaccharide transmembrane transporter/ myo-inositol transmembrane transporter/ sorbitol transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
31% identity, 84% coverage

TC 2.A.1.1.120 / E1WAV3 Major myo-inositol transporter, IolT1, of 456 aas from Salmonella typhimurium (strain SL1344)
31% identity, 96% coverage

Q84QH3 Putative sorbitol transporter from Prunus cerasus
31% identity, 85% coverage

Q64L87 Xylhp from Debaryomyces fabryi
32% identity, 85% coverage

SXYL_00132 D-xylose transporter XylE from Staphylococcus xylosus
33% identity, 95% coverage

CNBG_5746 galactose transporter from Cryptococcus deuterogattii R265
31% identity, 81% coverage

MAP3834 hypothetical protein from Mycobacterium avium subsp. paratuberculosis str. k10
34% identity, 93% coverage

Tanf_07060 D-xylose transporter XylE from Tannerella forsythia
33% identity, 87% coverage

M1AVD3 Mannitol transporter from Solanum tuberosum
31% identity, 88% coverage

CNAG_05387 galactose transporter from Cryptococcus neoformans var. grubii H99
32% identity, 83% coverage

ARAE_KLEOX / P45598 Arabinose-proton symporter; Arabinose transporter from Klebsiella oxytoca (see paper)
32% identity, 93% coverage

TC 2.A.1.1.32 / P15729 Glucose/fructose:H+ symporter, GlcP (see 4 papers)
sll0771 glucose transport protein from Synechocystis sp. PCC 6803
33% identity, 90% coverage

FVEG_11293 hypothetical protein from Fusarium verticillioides 7600
33% identity, 83% coverage

TC 2.A.1.1.65 / A0QZX3 Glucose permease GlcP (Pimentel-Schmitt et al., 2008) (most similar to 2.A.1.1.32) from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
MSMEG_4182 arabinose-proton symporter from Mycobacterium smegmatis str. MC2 155
35% identity, 86% coverage

Q7UF68 Xylose transporter from Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)
34% identity, 92% coverage

MAA_02403 hexose transporter from Metarhizium robertsii ARSEF 23
32% identity, 82% coverage

INT2_ARATH / Q9C757 Probable inositol transporter 2 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
TC 2.A.1.1.63 / Q9C757 Low affinity inositol (myoinsoitol (Km = 1 mM), scylloinositol, d-chiroinositol and mucoinositol):H+ symporter (expressed in the anther tapetum, the vasculature, and the leaf mesophyll from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
NP_174313 INT2 (INOSITOL TRANSPORTER 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
AT1G30220, NP_174313 inositol transporter 2 from Arabidopsis thaliana
38% identity, 64% coverage

BVU_0751 xylose/H+ symporter from Bacteroides vulgatus ATCC 8482
BVU_0751 sugar porter family MFS transporter from Phocaeicola vulgatus ATCC 8482
34% identity, 95% coverage

TC 2.A.1.1.35 / Q7BEC4 The major glucose (or 2-deoxyglucose) uptake transporter, GlcP from Streptomyces lividans (see paper)
SCO5578 sugar transporter from Streptomyces coelicolor A3(2)
SCO7153 sugar transporter from Streptomyces coelicolor A3(2)
32% identity, 90% coverage

GOX0808 Galactose-proton symporter from Gluconobacter oxydans 621H
34% identity, 94% coverage

BT_3606 sugar-proton symporter from Bacteroides thetaiotaomicron VPI-5482
33% identity, 91% coverage

GRMZM2G063824 carbohydrate transporter/ sugar porter from Zea mays
31% identity, 86% coverage

TC 2.A.1.1.40 / Q64L87 The xylose facilitator, Xylhp from Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
32% identity, 85% coverage

P93075 BvcDNA-205 protein from Beta vulgaris subsp. vulgaris
29% identity, 83% coverage

SCLAV_4529 sugar porter family MFS transporter from Streptomyces clavuligerus
32% identity, 89% coverage

AT2G16130 mannitol transporter, putative from Arabidopsis thaliana
NP_179210 polyol/monosaccharide transporter 2 from Arabidopsis thaliana
31% identity, 86% coverage

TC 2.A.1.1.123 / AIU41385.1 Sorbitol (D-Glucitol):H+ co-transporter, SOT1 (Km for sorbitol of 0.64 mM) of 509 aas and 12 TMSs (Gao et al. 2003). SOT1 of P. cerasus is expressed throughout fruit development, but especially when growth and sorbitol accumulation rates are highest. In leaves, PcSOT1 expression is highest in young, expanding tissues, but substantially less in mature leaves from Prunus salicina
31% identity, 85% coverage

XP_828610 sugar transporter, putative from Trypanosoma brucei brucei TREU927
33% identity, 93% coverage

B4FQN6 Putative polyol transporter 1 from Zea mays
GRMZM2G153920 sorbitol transporter from Zea mays
31% identity, 81% coverage

E6RCH7 High-affinity glucose transporter of the major facilitator superfamily, putative Hxt4p from Cryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071)
32% identity, 83% coverage

Q90592 Solute carrier family 2, facilitated glucose transporter member 2 from Gallus gallus
35% identity, 77% coverage

BBA_03013 hexose transporter from Beauveria bassiana ARSEF 2860
32% identity, 82% coverage

FTN_0688 galactose-proton symporter, major facilitator superfamily (MFS) transport protein from Francisella tularensis subsp. novicida U112
33% identity, 95% coverage

NP_997061 solute carrier family 2, facilitated glucose transporter member 2 from Gallus gallus
35% identity, 76% coverage

Pc22g09740 uncharacterized protein from Penicillium rubens
31% identity, 80% coverage

XP_006237358 solute carrier family 2, facilitated glucose transporter member 3 isoform X1 from Rattus norvegicus
32% identity, 89% coverage

TC 2.A.1.1.75 / Q9XIH7 The fructose/xylose:H+ symporter, PMT1 (polyol monosaccharide transporter-1). Also transports other substrates at lower rates. PMT2 is largely of the same sequence and function. Both are present in pollen and young xylem cells (Klepek et al., 2005). A similar ortholog has been identifed in pollen grains of Petunia hybrida from Arabidopsis thaliana (see 2 papers)
AT2G16120 mannitol transporter, putative from Arabidopsis thaliana
NP_179209 polyol/monosaccharide transporter 1 from Arabidopsis thaliana
31% identity, 86% coverage

GTR1_DROME / Q8IRI6 Glucose transporter type 1 from Drosophila melanogaster (Fruit fly) (see paper)
32% identity, 30% coverage

GTR1_RAT / P11167 Solute carrier family 2, facilitated glucose transporter member 1; Glucose transporter type 1, erythrocyte/brain; GLUT-1 from Rattus norvegicus (Rat) (see 6 papers)
NP_620182 solute carrier family 2, facilitated glucose transporter member 1 from Rattus norvegicus
33% identity, 90% coverage

Afu2g05190 MFS monosaccharide transporter, putative from Aspergillus fumigatus Af293
31% identity, 80% coverage

TC 2.A.1.1.81 / Q0SE66 The glucose uptake porter, GluP from Rhodococcus sp. (strain RHA1) (see paper)
33% identity, 88% coverage

GTR1_BOVIN / P27674 Solute carrier family 2, facilitated glucose transporter member 1; Glucose transporter type 1, erythrocyte/brain; GLUT-1 from Bos taurus (Bovine) (see paper)
NP_777027 solute carrier family 2, facilitated glucose transporter member 1 from Bos taurus
XP_006068373 solute carrier family 2, facilitated glucose transporter member 1 isoform X1 from Bubalus bubalis
33% identity, 90% coverage

GTR1_MOUSE / P17809 Solute carrier family 2, facilitated glucose transporter member 1; Glucose transporter type 1, erythrocyte/brain; GLUT-1; GT1 from Mus musculus (Mouse) (see 7 papers)
NP_035530 solute carrier family 2, facilitated glucose transporter member 1 isoform 1 from Mus musculus
33% identity, 90% coverage

R0K3X3 Solute carrier family 2, facilitated glucose transporter member 5 (Fragment) from Anas platyrhynchos
32% identity, 89% coverage

CNAG_06521 hypothetical protein from Cryptococcus neoformans var. grubii H99
32% identity, 83% coverage

K9H0P1 MFS monosaccharide transporter, putative from Penicillium digitatum (strain Pd1 / CECT 20795)
30% identity, 83% coverage

O62787 Solute carrier family 2, facilitated glucose transporter member 3 from Sus scrofa
33% identity, 87% coverage

GTR3_SHEEP / P47843 Solute carrier family 2, facilitated glucose transporter member 3; Glucose transporter type 3, brain; GLUT-3 from Ovis aries (Sheep) (see paper)
NP_001009770 solute carrier family 2, facilitated glucose transporter member 3 from Ovis aries
32% identity, 87% coverage

NP_001034897 solute carrier family 2, facilitated glucose transporter member 1a from Danio rerio
34% identity, 88% coverage

GTR3_RAT / Q07647 Solute carrier family 2, facilitated glucose transporter member 3; Glucose transporter type 3, brain; GLUT-3 from Rattus norvegicus (Rat) (see 3 papers)
TC 2.A.1.1.12 / Q07647 Glucose uniporter, Glut3 (also transports dehydro-ascorbate; Maulén et al., 2003). Down-regulated in the brains of Alzheimer's disease patients (Liu et al., 2008b) from Rattus norvegicus (Rat) (see 2 papers)
32% identity, 90% coverage

NP_777028 solute carrier family 2, facilitated glucose transporter member 3 from Bos taurus
32% identity, 87% coverage

XP_011536149 proton myo-inositol cotransporter isoform X1 from Homo sapiens
30% identity, 72% coverage

GTR3_RABIT / Q9XSC2 Solute carrier family 2, facilitated glucose transporter member 3; Glucose transporter type 3, brain; GLUT-3 from Oryctolagus cuniculus (Rabbit) (see paper)
32% identity, 89% coverage

AO090010000488 No description from Aspergillus oryzae RIB40
33% identity, 86% coverage

Ga0059261_1777 D-fructose transporter, sugar porter family from Sphingomonas koreensis DSMZ 15582
33% identity, 91% coverage

FVEG_02081 hypothetical protein from Fusarium verticillioides 7600
31% identity, 84% coverage

Q59GX2 Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) from Homo sapiens
32% identity, 85% coverage

XP_020952567 solute carrier family 2, facilitated glucose transporter member 1 from Sus scrofa
32% identity, 90% coverage

SLC2A1 / P11166 solute carrier family 2, facilitated glucose transporter member 1 from Homo sapiens (see 25 papers)
GTR1_HUMAN / P11166 Solute carrier family 2, facilitated glucose transporter member 1; Glucose transporter type 1, erythrocyte/brain; GLUT-1; HepG2 glucose transporter from Homo sapiens (Human) (see 36 papers)
TC 2.A.1.1.28 / P11166 The erythrocyte/brain hexose facilitator, glucose transporter-1, Gtr1 or Glut1. Transports D-glucose, dehydroascorbate, arsenite and the flavonone, quercetin, via one pathway and water via a distinct channel. Sugar transport has been suggested to function via a sliding mechanism involving several sugar binding sites (Cunningham et al., 2006). Glut1 is the receptor for human T-cell leukemia virus (HTLV)) (Manel et al., 2003). It is regulated by stomatin (TC# 8.A.21) to take up dehydroascorbate (Montel-Hagen et al., 2008). Mutations cause Glut1 deficiency syndrome, a human encephalopathy that results from decreased glucose flux through the blood brain barrier from Homo sapiens (Human) (see 21 papers)
NP_006507 solute carrier family 2, facilitated glucose transporter member 1 from Homo sapiens
32% identity, 90% coverage

AT1G05030 hexose transporter, putative from Arabidopsis thaliana
34% identity, 82% coverage

TC 2.A.1.1.45 / Q8L6Z8 Vacuolar (tonoplast) glucose transporter1, Vgt1 (important for seed germination and flowering) from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
RF|NP_186959.2 D-xylose-proton symporter-like 1 from Arabidopsis thaliana
NP_186959 vacuolar glucose transporter 1 from Arabidopsis thaliana
AT3G03090 AtVGT1 (Arabidopsis thaliana vacuolar glucose transporter 1); carbohydrate transmembrane transporter/ fructose transmembrane transporter/ glucose transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
32% identity, 85% coverage

P58352 Solute carrier family 2, facilitated glucose transporter member 3 from Bos taurus
32% identity, 87% coverage

GTR3_HUMAN / P11169 Solute carrier family 2, facilitated glucose transporter member 3; Glucose transporter type 3, brain; GLUT-3 from Homo sapiens (Human) (see 6 papers)
TC 2.A.1.1.91 / P11169 Solute carrier family 2, facilitated glucose transporter member 3 (Glucose transporter type 3, brain) (GLUT-3 or GLUT3). It mediates the facilitative uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and probably dehydroascorbate, but not fructose from Homo sapiens (see 6 papers)
NP_008862 solute carrier family 2, facilitated glucose transporter member 3 from Homo sapiens
31% identity, 86% coverage

TC 2.A.1.1.86 / H9BPB6 The sea bream facilitative glucose transporter 1 (GLUT1) from Sparus aurata
32% identity, 87% coverage

NP_001152798 solute carrier family 2, facilitated glucose transporter member 1 from Canis lupus familiaris
32% identity, 90% coverage

NP_001090886 solute carrier family 2, facilitated glucose transporter member 2 from Sus scrofa
34% identity, 78% coverage

SS1G_06402 hypothetical protein from Sclerotinia sclerotiorum 1980 UF-70
35% identity, 83% coverage

P13355 Solute carrier family 2, facilitated glucose transporter member 1 from Oryctolagus cuniculus
32% identity, 90% coverage

P28568 Solute carrier family 2, facilitated glucose transporter member 3 from Gallus gallus
30% identity, 91% coverage

NP_990842 solute carrier family 2, facilitated glucose transporter member 3 from Gallus gallus
30% identity, 91% coverage

FVEG_10988 hypothetical protein from Fusarium verticillioides 7600
31% identity, 82% coverage

Pc21g19770 uncharacterized protein from Penicillium rubens
33% identity, 79% coverage

7sptA / P11169 Crystal structure of exofacial state human glucose transporter glut3 (see paper)
31% identity, 91% coverage

GTR1_CHICK / P46896 Solute carrier family 2, facilitated glucose transporter member 1; Glucose transporter type 1; GLUT-1; GT1 from Gallus gallus (Chicken) (see paper)
32% identity, 92% coverage

NP_990540 solute carrier family 2, facilitated glucose transporter member 1 from Gallus gallus
32% identity, 90% coverage

An11g05280 uncharacterized protein from Aspergillus niger
32% identity, 81% coverage

STP4_ARATH / Q39228 Sugar transport protein 4; Hexose transporter 4 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
TC 2.A.1.1.49 / Q39228 The sink-specific, stress-regulated monosaccharide uptake porter, STP4. (Induced upon wounding or infection with bacteria or fungi; expressed in roots and flowers) from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
STP4 / RF|NP_188627.1 sugar transport protein 4 from Arabidopsis thaliana (see paper)
AT3G19930 STP4 (SUGAR TRANSPORTER 4); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter from Arabidopsis thaliana
29% identity, 89% coverage

XP_042998602 uncharacterized protein from Ustilaginoidea virens
31% identity, 78% coverage

GRMZM2G064437 proton myo-inositol cotransporter from Zea mays
33% identity, 85% coverage

MST8_ORYSJ / Q94EC4 Sugar transport protein MST8; Monosaccharide transporter 8; OsMST8; Sugar:proton symporter MST8 from Oryza sativa subsp. japonica (Rice) (see 2 papers)
31% identity, 82% coverage

TC 2.A.1.1.50 / Q94AZ2 The glucose/fructose:H+ symporter, STP13 (sugar transport protein 13). Expressed in vascular tissues and induced during programmed cell death from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
STP13 / RF|NP_198006.1 sugar transport protein 13 from Arabidopsis thaliana (see paper)
NP_198006 Major facilitator superfamily protein from Arabidopsis thaliana
AT5G26340 MSS1; carbohydrate transmembrane transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose symporter/ sugar:hydrogen symporter from Arabidopsis thaliana
31% identity, 85% coverage

LOC8056880 sugar transport protein 13 from Sorghum bicolor
31% identity, 85% coverage

FVEG_07757 hypothetical protein from Fusarium verticillioides 7600
31% identity, 83% coverage

C0PHL2 Monosaccharide transporter1 from Zea mays
31% identity, 81% coverage

lpp1624 hypothetical protein from Legionella pneumophila str. Paris
32% identity, 91% coverage

STP2_ARATH / Q9LNV3 Sugar transport protein 2; Hexose transporter 2 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
TC 2.A.1.1.48 / Q9LNV3 The pentose/hexose transporter (sugar transport protein 2), STP2. (Expressed during pollen maturation and early stages of gametophyte development) from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
AT1G07340 ATSTP2 (SUGAR TRANSPORTER 2); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
32% identity, 87% coverage

B6TDG1 Proton myo-inositol cotransporter from Zea mays
33% identity, 85% coverage

SS1G_07132 hypothetical protein from Sclerotinia sclerotiorum 1980 UF-70
32% identity, 76% coverage

STP10_ARATH / Q9LT15 Sugar transport protein 10; AtSTP10; D-glucose-H(+) symport protein STP10; D-glucose-proton symporter STP10; Hexose transporter 10 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
TC 2.A.1.1.124 / Q9LT15 The high affinity sugar:H+ symporter (sugar uptake) porter of 514 aas and 12 TMSs, STP10. It transports glucose, galactose and mannose, and is therefore a hexose transporter (Rottmann et al. 2016). The 2.4 from Arabidopsis thaliana
NP_188628 Major facilitator superfamily protein from Arabidopsis thaliana
AT3G19940 sugar transporter, putative from Arabidopsis thaliana
30% identity, 85% coverage

AL01_03445 sugar porter family MFS transporter from Bombella intestini
34% identity, 95% coverage

FTH_0853 MFS family major facilitator transporter from Francisella tularensis subsp. holarctica OSU18
31% identity, 94% coverage

7aaqA / Q9LT15 Sugar/h+ symporter stp10 in outward occluded conformation (see paper)
30% identity, 89% coverage

FGSG_04700 hypothetical protein from Fusarium graminearum PH-1
32% identity, 82% coverage

An11g01100 uncharacterized protein from Aspergillus niger
32% identity, 83% coverage

LOC123092952 sugar transport protein MST4 from Triticum aestivum
30% identity, 87% coverage

Bbr_0851 sugar porter family MFS transporter from Bifidobacterium breve UCC2003
30% identity, 89% coverage

LOC123098224 sugar transport protein MST4-like from Triticum aestivum
30% identity, 87% coverage

XP_043000657 uncharacterized protein from Ustilaginoidea virens
31% identity, 82% coverage

An06g00560 uncharacterized protein from Aspergillus niger
30% identity, 80% coverage

XP_042994564 uncharacterized protein from Ustilaginoidea virens
33% identity, 74% coverage

LOC102620675 sugar transport protein 13 from Citrus sinensis
31% identity, 82% coverage

ITR2_SCHPO / P87110 Myo-inositol transporter 2 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
itr2 / RF|NP_593320.1 MFS myo-inositol transporter from Schizosaccharomyces pombe (see 2 papers)
31% identity, 78% coverage

Sb02g024060 No description from Sorghum bicolor
34% identity, 88% coverage

ACA1_060920 transporter, major facilitator superfamily protein from Acanthamoeba castellanii str. Neff
32% identity, 70% coverage

LOC123085159 sugar transport protein MST4-like from Triticum aestivum
30% identity, 83% coverage

TC 2.A.1.1.117 / G4N740 Glucose transporter Rco-3 or MoST1. MoST1 plays a specific role in conidiation and mycelial melanization which is not shared by other hexose transporter family members in M. oryzae from Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
XP_003716272 glucose transporter rco-3 from Pyricularia oryzae 70-15
33% identity, 78% coverage

TC 2.A.1.1.119 / A2R3H2 The galacturonic acid (galacturonate) uptake porter, GatA, of 518 aas and 12 TMSs from Aspergillus niger (strain CBS 513.88 / FGSC A1513)
An14g04280 uncharacterized protein from Aspergillus niger
31% identity, 88% coverage

GLF_ZYMMO / P21906 Glucose facilitated diffusion protein from Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) (see 2 papers)
TC 2.A.1.1.4 / P21906 Glucose uniporter from Zymomonas mobilis (see 2 papers)
ZMO0366 sugar transporter from Zymomonas mobilis subsp. mobilis ZM4
33% identity, 90% coverage

GTR3_MOUSE / P32037 Solute carrier family 2, facilitated glucose transporter member 3; Glucose transporter type 3, brain; GLUT-3 from Mus musculus (Mouse) (see 3 papers)
NP_035531 solute carrier family 2, facilitated glucose transporter member 3 isoform b from Mus musculus
31% identity, 90% coverage

TRE12_DROME / Q8MKK4 Facilitated trehalose transporter Tret1-2 homolog; DmTret1-2 from Drosophila melanogaster (Fruit fly) (see paper)
34% identity, 80% coverage

MST4_ORYSJ / Q10PW9 Sugar transport protein MST4; Monosaccharide transporter 4; OsMST4; Sugar:proton symporter MST4 from Oryza sativa subsp. japonica (Rice) (see 2 papers)
31% identity, 86% coverage

K7TK04 Carbohydrate transporter/ sugar porter from Zea mays
31% identity, 87% coverage

M1D4R5 Hexose transporter from Solanum tuberosum
32% identity, 82% coverage

Q102R8 Glucose transporter 2 from Danio rerio
NP_001036186 solute carrier family 2, facilitated glucose transporter member 2 from Danio rerio
30% identity, 88% coverage

TC 2.A.1.1.103 / Q0WWW9 D-xylose-proton symporter-like 3, chloroplastic from Arabidopsis thaliana (see 7 papers)
NP_200733 Major facilitator superfamily protein from Arabidopsis thaliana
AT5G59250 sugar transporter family protein from Arabidopsis thaliana
32% identity, 78% coverage

ATEG_07144 uncharacterized protein from Aspergillus terreus NIH2624
30% identity, 83% coverage

INT3_ARATH / Q9ZQP6 Probable inositol transporter 3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT2G35740 INT3 (NOSITOL TRANSPORTER 3); carbohydrate transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
36% identity, 54% coverage

GTR10_DANRE / F1R0H0 Solute carrier family 2, facilitated glucose transporter member 10; Glucose transporter type 10; GLUT-10 from Danio rerio (Zebrafish) (Brachydanio rerio) (see 2 papers)
XP_005172836 solute carrier family 2, facilitated glucose transporter member 10 isoform X1 from Danio rerio
31% identity, 83% coverage

SS1G_03579 hypothetical protein from Sclerotinia sclerotiorum 1980 UF-70
33% identity, 81% coverage

STP11_ARATH / Q9FMX3 Sugar transport protein 11; Hexose transporter 11 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
TC 2.A.1.1.61 / Q9FMX3 High affinity monosaccharide (Km = 25 µM) transporter (takes up glucose, galactose, mannose, xylose and 3-O-methylglucose, but not fructose and ribose), STP11 (expressed in pollen tubes) from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
stp11 / CAC69075.1 STP11 protein from Arabidopsis thaliana (see paper)
NP_197718 sugar transporter 11 from Arabidopsis thaliana
AT5G23270 STP11 (SUGAR TRANSPORTER 11); carbohydrate transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
31% identity, 85% coverage

TC 2.A.1.1.20 / Q01440 Myoinositol:H+ symporter, MIT from Leishmania donovani (see paper)
32% identity, 79% coverage

XP_005201725 solute carrier family 2, facilitated glucose transporter member 2 isoform X1 from Bos taurus
31% identity, 80% coverage

NP_001261233 glucose transporter 1, isoform R from Drosophila melanogaster
32% identity, 53% coverage

LOC8155361 sugar transport protein 1 from Sorghum bicolor
30% identity, 84% coverage

U3IRP7 Solute carrier family 2 member 2 from Anas platyrhynchos platyrhynchos
34% identity, 78% coverage

STP9_ARATH / Q9SX48 Sugar transport protein 9; Hexose transporter 9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
stp9 / CAC69072.1 STP9 protein from Arabidopsis thaliana (see paper)
AT1G50310 STP9 (SUGAR TRANSPORTER 9); carbohydrate transmembrane transporter/ sugar:hydrogen symporter from Arabidopsis thaliana
30% identity, 85% coverage

NP_850483 Major facilitator superfamily protein from Arabidopsis thaliana
AT2G48020, NP_850483 sugar transporter, putative from Arabidopsis thaliana
33% identity, 95% coverage

Q41144 Sugar carrier protein C from Ricinus communis
28% identity, 82% coverage

B7Z5A7 cDNA FLJ57557, highly similar to Solute carrier family 2, facilitated glucose transporter member 3 from Homo sapiens
32% identity, 84% coverage

LOC4352335 polyol transporter 5 from Oryza sativa Japonica Group
30% identity, 90% coverage

NCU08180 high-affinity glucose transporter from Neurospora crassa OR74A
32% identity, 69% coverage

BC1G_08389 hypothetical protein from Botrytis cinerea B05.10
32% identity, 81% coverage

Q3L7K6 Hexose transporter from Vitis vinifera
NP_001268207 hexose transporter from Vitis vinifera
30% identity, 82% coverage

TC 2.A.1.1.98 / Q9FRL3 Sugar transporter ERD6-like 6 from Arabidopsis thaliana (see 3 papers)
AT1G75220 integral membrane protein, putative from Arabidopsis thaliana
33% identity, 87% coverage

NCU04537 monosaccharide transporter from Neurospora crassa OR74A
30% identity, 81% coverage

E2C2M2 Glucose transporter type 1 from Harpegnathos saltator
31% identity, 58% coverage

Q6CFJ6 YALI0B06391p from Yarrowia lipolytica (strain CLIB 122 / E 150)
31% identity, 80% coverage

lpg1653 D-xylose-proton symporter from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
32% identity, 91% coverage

ATEG_02489 uncharacterized protein from Aspergillus terreus NIH2624
31% identity, 81% coverage

PDIP_03090 MFS monosaccharide transporter, putative from Penicillium digitatum
32% identity, 82% coverage

LOC18046355 sugar transporter ERD6-like 7 from Citrus x clementina
33% identity, 92% coverage

H2QNR0 Solute carrier family 2, facilitated glucose transporter member 2 from Pan troglodytes
32% identity, 77% coverage

B3KVN0 Solute carrier family 2, facilitated glucose transporter member 1 from Homo sapiens
32% identity, 83% coverage

CNAG_07641 monosaccharide transporter from Cryptococcus neoformans var. grubii H99
30% identity, 72% coverage

STP2 sugar transport protein 2 from Arabidopsis thaliana (see paper)
31% identity, 83% coverage

LOC110816261 sugar transport protein 14 from Carica papaya
30% identity, 82% coverage

NCU02582, XP_965713 RCO3 from Neurospora crassa OR74A
32% identity, 75% coverage

TC 2.A.1.1.14 / P15686 Hexose:H+ symporter of 534 aas and 12 TMSs from Chlorella kessleri (see 2 papers)
31% identity, 81% coverage

SACE_6319 probable sugar-transport integral membrane protein SugI from Saccharopolyspora erythraea NRRL 2338
33% identity, 93% coverage

F2D5N7 Predicted protein from Hordeum vulgare subsp. vulgare
31% identity, 82% coverage

NP_001273166 solute carrier family 2, facilitated glucose transporter member 14 isoform d from Homo sapiens
31% identity, 80% coverage

Q8LBI9 Sugar transporter ERD6-like 16 from Arabidopsis thaliana
AT5G18840 sugar transporter, putative from Arabidopsis thaliana
31% identity, 92% coverage

Afu1g03530 MFS sugar transporter, putative from Aspergillus fumigatus Af293
30% identity, 77% coverage

XP_011511389 solute carrier family 2, facilitated glucose transporter member 2 isoform X1 from Homo sapiens
32% identity, 79% coverage

5eqgA / P11166 Human glut1 in complex with inhibitor (2~{s})-3-(4-fluorophenyl)-2-[2- (3-hydroxyphenyl)ethanoylamino]-~{n}-[(1~{s})-1- phenylethyl]propanamide (see paper)
32% identity, 90% coverage

CNBG_0457 MFS transporter SP family solute carrier family 2 (myo-inositol transporter) member 13 from Cryptococcus deuterogattii R265
33% identity, 78% coverage

SLC2A2 / P11168 solute carrier family 2, facilitated glucose transporter member 2 from Homo sapiens (see 3 papers)
GTR2_HUMAN / P11168 Solute carrier family 2, facilitated glucose transporter member 2; Glucose transporter type 2, liver; GLUT-2 from Homo sapiens (Human) (see 9 papers)
TC 2.A.1.1.29 / P11168 Glucosamine/glucose uniporter, Glut-2; it may also transport dehydroascorbate (Mardones et al., 2011; from Homo sapiens (Human) (see 7 papers)
NP_000331 solute carrier family 2, facilitated glucose transporter member 2 isoform 1 from Homo sapiens
32% identity, 77% coverage

New Search

For advice on how to use these tools together, see Interactive tools for functional annotation of bacterial genomes.

Statistics

The PaperBLAST database links 784,739 different protein sequences to 1,253,012 scientific articles. Searches against EuropePMC were last performed on November 25 2024.

How It Works

PaperBLAST builds a database of protein sequences that are linked to scientific articles. These links come from automated text searches against the articles in EuropePMC and from manually-curated information from GeneRIF, UniProtKB/Swiss-Prot, BRENDA, CAZy (as made available by dbCAN), BioLiP, CharProtDB, MetaCyc, EcoCyc, TCDB, REBASE, the Fitness Browser, and a subset of the European Nucleotide Archive with the /experiment tag. Given this database and a protein sequence query, PaperBLAST uses protein-protein BLAST to find similar sequences with E < 0.001.

To build the database, we query EuropePMC with locus tags, with RefSeq protein identifiers, and with UniProt accessions. We obtain the locus tags from RefSeq or from MicrobesOnline. We use queries of the form "locus_tag AND genus_name" to try to ensure that the paper is actually discussing that gene. Because EuropePMC indexes most recent biomedical papers, even if they are not open access, some of the links may be to papers that you cannot read or that our computers cannot read. We query each of these identifiers that appears in the open access part of EuropePMC, as well as every locus tag that appears in the 500 most-referenced genomes, so that a gene may appear in the PaperBLAST results even though none of the papers that mention it are open access. We also incorporate text-mined links from EuropePMC that link open access articles to UniProt or RefSeq identifiers. (This yields some additional links because EuropePMC uses different heuristics for their text mining than we do.)

For every article that mentions a locus tag, a RefSeq protein identifier, or a UniProt accession, we try to select one or two snippets of text that refer to the protein. If we cannot get access to the full text, we try to select a snippet from the abstract, but unfortunately, unique identifiers such as locus tags are rarely provided in abstracts.

PaperBLAST also incorporates manually-curated protein functions:

Except for GeneRIF and ENA, the curated entries include a short curated description of the protein's function. For entries from BioLiP, the protein's function may not be known beyond binding to the ligand. Many of these entries also link to articles in PubMed.

For more information see the PaperBLAST paper (mSystems 2017) or the code. You can download PaperBLAST's database here.

Changes to PaperBLAST since the paper was written:

Many of these changes are described in Interactive tools for functional annotation of bacterial genomes.

Secrets

PaperBLAST cannot provide snippets for many of the papers that are published in non-open-access journals. This limitation applies even if the paper is marked as "free" on the publisher's web site and is available in PubmedCentral or EuropePMC. If a journal that you publish in is marked as "secret," please consider publishing elsewhere.

Omissions from the PaperBLAST Database

Many important articles are missing from PaperBLAST, either because the article's full text is not in EuropePMC (as for many older articles), or because the paper does not mention a protein identifier such as a locus tag, or because of PaperBLAST's heuristics. If you notice an article that characterizes a protein's function but is missing from PaperBLAST, please notify the curators at UniProt or add an entry to GeneRIF. Entries in either of these databases will eventually be incorporated into PaperBLAST. Note that to add an entry to UniProt, you will need to find the UniProt identifier for the protein. If the protein is not already in UniProt, you can ask them to create an entry. To add an entry to GeneRIF, you will need an NCBI Gene identifier, but unfortunately many prokaryotic proteins in RefSeq do not have corresponding Gene identifers.

References

PaperBLAST: Text-mining papers for information about homologs.
M. N. Price and A. P. Arkin (2017). mSystems, 10.1128/mSystems.00039-17.

Europe PMC in 2017.
M. Levchenko et al (2017). Nucleic Acids Research, 10.1093/nar/gkx1005.

Gene indexing: characterization and analysis of NLM's GeneRIFs.
J. A. Mitchell et al (2003). AMIA Annu Symp Proc 2003:460-464.

UniProt: the universal protein knowledgebase.
The UniProt Consortium (2016). Nucleic Acids Research, 10.1093/nar/gkw1099.

BRENDA in 2017: new perspectives and new tools in BRENDA.
S. Placzek et al (2017). Nucleic Acids Research, 10.1093/nar/gkw952.

The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.
I. M. Keeseler et al (2016). Nucleic Acids Research, 10.1093/nar/gkw1003.

The MetaCyc database of metabolic pathways and enzymes.
R. Caspi et al (2018). Nucleic Acids Research, 10.1093/nar/gkx935.

CharProtDB: a database of experimentally characterized protein annotations.
R. Madupu et al (2012). Nucleic Acids Research, 10.1093/nar/gkr1133.

The carbohydrate-active enzymes database (CAZy) in 2013.
V. Lombard et al (2014). Nucleic Acids Research, 10.1093/nar/gkt1178.

The Transporter Classification Database (TCDB): recent advances
M. H. Saier, Jr. et al (2016). Nucleic Acids Research, 10.1093/nar/gkv1103.

REBASE - a database for DNA restriction and modification: enzymes, genes and genomes.
R. J. Roberts et al (2015). Nucleic Acids Research, 10.1093/nar/gku1046.

Deep annotation of protein function across diverse bacteria from mutant phenotypes.
M. N. Price et al (2016). bioRxiv, 10.1101/072470.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory