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PaperBLAST

PaperBLAST Hits for reanno::acidovorax_3H11:Ac3H11_1140 2-methylisocitrate dehydratase (EC 4.2.1.99) (Acidovorax sp. GW101-3H11) (980 a.a., MATSRKSSPQ...)

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Predict protein localization: PSORTb

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Found 262 similar proteins in the literature:

Ac3H11_1140 2-methylisocitrate dehydratase (EC 4.2.1.99) from Acidovorax sp. GW101-3H11
100% identity, 100% coverage

H16_A2638 aconitate hydratase from Ralstonia eutropha H16
H16_A2638 aconitate hydratase AcnA from Cupriavidus necator H16
72% identity, 98% coverage

BCAM0961 aconitate hydratase from Burkholderia cenocepacia J2315
71% identity, 98% coverage

BB1844 putative aconitate hydratase from Bordetella bronchiseptica RB50
70% identity, 98% coverage

BPSS1726 aconitate hydratase from Burkholderia pseudomallei K96243
71% identity, 98% coverage

Rmet_2492 aconitate hydratase AcnA from Cupriavidus metallidurans CH34
Rmet_2492 aconitate hydratase 1 from Ralstonia metallidurans CH34
71% identity, 98% coverage

BP2014 putative aconitate hydratase from Bordetella pertussis Tohama I
Q7VX12 Aconitate hydratase from Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
70% identity, 98% coverage

Q2T7J6 Aconitate hydratase from Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
BTH_II0654 aconitate hydratase 1 from Burkholderia thailandensis E264
71% identity, 98% coverage

Hsero_2979 aconitate hydratase AcnA from Herbaspirillum seropedicae SmR1
71% identity, 98% coverage

Q0BAG3 Aconitate hydratase from Burkholderia ambifaria (strain ATCC BAA-244 / DSM 16087 / CCUG 44356 / LMG 19182 / AMMD)
70% identity, 98% coverage

A0A090AMG4 aconitate hydratase (EC 4.2.1.3) from Achromobacter denitrificans (see paper)
69% identity, 98% coverage

Dgeo_1682 aconitate hydratase 1 from Deinococcus geothermalis DSM 11300
53% identity, 97% coverage

Amuc_0904 aconitate hydratase 1 from Akkermansia muciniphila ATCC BAA-835
53% identity, 98% coverage

XALc_1349 probable aconitate hydratase 1 protein from Xanthomonas albilineans
54% identity, 97% coverage

rpfa / CAA05170.1 aconitase from Xanthomonas campestris (see paper)
54% identity, 98% coverage

Mal48_48270 aconitate hydratase AcnA from Thalassoglobus polymorphus
53% identity, 98% coverage

YP_091630 CitB from Bacillus licheniformis DSM 13
51% identity, 99% coverage

lmo1641 highly similar to aconitate hydratases from Listeria monocytogenes EGD-e
NP_465166 aconitate hydratase from Listeria monocytogenes EGD-e
51% identity, 97% coverage

LMRG_RS08180 aconitate hydratase AcnA from Listeria monocytogenes 10403S
LMRG_01325 aconitate hydratase 1 from Listeria monocytogenes 10403S
52% identity, 97% coverage

GYA98_RS08030 aconitate hydratase AcnA from Bacillus velezensis
51% identity, 98% coverage

citB / P09339 aconitate hydratase (bifunctional aconitase) (EC 4.2.1.99; EC 4.2.1.3) from Bacillus subtilis (strain 168) (see 21 papers)
ACNA_BACSU / P09339 Aconitate hydratase A; ACN; Aconitase; Aconitate/2-methylaconitate hydratase; Iron-responsive protein-like; IRP-like; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.- from Bacillus subtilis (strain 168) (see 7 papers)
P09339 aconitate hydratase (EC 4.2.1.3) from Bacillus subtilis (see paper)
NP_389683 aconitate hydratase (bifunctional aconitase) from Bacillus subtilis subsp. subtilis str. 168
BSU18000 aconitate hydratase from Bacillus subtilis subsp. subtilis str. 168
51% identity, 100% coverage

PXO_00064 aconitate hydratase 1 from Xanthomonas oryzae pv. oryzae PXO99A
53% identity, 97% coverage

BRADO0393 aconitate hydratase from Bradyrhizobium sp. ORS278
52% identity, 96% coverage

DW68_010115 aconitate hydratase AcnA from Pseudomonas mendocina S5.2
53% identity, 97% coverage

HP15_3433 Aconitate hydratase (EC 4.2.1.3) from Marinobacter adhaerens HP15
52% identity, 98% coverage

GL4_0055 aconitate hydratase AcnA from Methyloceanibacter caenitepidi
51% identity, 97% coverage

Mal4_15300 aconitate hydratase AcnA from Maioricimonas rarisocia
54% identity, 95% coverage

ACNA_THET8 / Q5SMF6 Aconitate hydratase A; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; Iron-responsive protein-like; IRP-like; Probable 2-methyl-cis-aconitate hydratase; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
YP_143992 aconitate hydratase (aconitase) from Thermus thermophilus HB8
52% identity, 98% coverage

XF_0290 aconitate hydratase AcnA from Xylella fastidiosa 9a5c
XF0290 aconitase from Xylella fastidiosa 9a5c
52% identity, 97% coverage

XP_002524184 aconitate hydratase, cytoplasmic from Ricinus communis
51% identity, 98% coverage

MMSR116_03790, MMSR116_RS03750 aconitate hydratase AcnA from Methylobacterium mesophilicum SR1.6/6
51% identity, 98% coverage

Poly24_20280 aconitate hydratase AcnA from Rosistilla carotiformis
52% identity, 98% coverage

BAS3408 aconitate hydratase 1 from Bacillus anthracis str. Sterne
GBAA3677 aconitate hydratase 1 from Bacillus anthracis str. 'Ames Ancestor'
51% identity, 97% coverage

P49608 Aconitate hydratase, cytoplasmic from Cucurbita maxima
51% identity, 99% coverage

W8Y6I8 Aconitate hydratase from Bacillus thuringiensis DB27
50% identity, 97% coverage

LOC18055416 aconitate hydratase, cytoplasmic from Citrus x clementina
51% identity, 97% coverage

LOC105178516 aconitate hydratase, cytoplasmic from Sesamum indicum
50% identity, 97% coverage

A9HEZ2 Aconitate hydratase from Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5)
50% identity, 98% coverage

G7JDJ4 Aconitate hydratase from Medicago truncatula
50% identity, 99% coverage

D7T1R6 Aconitate hydratase from Vitis vinifera
49% identity, 100% coverage

CCNA_03781 aconitate hydratase from Caulobacter crescentus NA1000
CC_3667 aconitate hydratase from Caulobacter crescentus CB15
51% identity, 96% coverage

BC3616 Aconitate hydratase from Bacillus cereus ATCC 14579
50% identity, 97% coverage

ACNA_BRADU / P70920 Aconitate hydratase A; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; Iron-responsive protein-like; IRP-like; Probable 2-methyl-cis-aconitate hydratase; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) (see paper)
bll0466 aconitase from Bradyrhizobium japonicum USDA 110
50% identity, 96% coverage

DR1720 aconitate hydratase from Deinococcus radiodurans R1
Q9RTN7 Aconitate hydratase A from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
52% identity, 97% coverage

MA0250 aconitate hydratase from Methanosarcina acetivorans C2A
52% identity, 97% coverage

B9SXB6 Aconitate hydratase from Ricinus communis
50% identity, 98% coverage

XP_002530635 aconitate hydratase 1 from Ricinus communis
50% identity, 98% coverage

ACO3M_ARATH / Q9SIB9 Aconitate hydratase 3, mitochondrial; Aconitase 3; mACO1; Citrate hydro-lyase 3; EC 4.2.1.3 from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
Q9SIB9 aconitate hydratase (EC 4.2.1.3) from Arabidopsis thaliana (see paper)
NP_178634 aconitase 3 from Arabidopsis thaliana
AT2G05710 aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative from Arabidopsis thaliana
49% identity, 98% coverage

K7KYB1 Aconitate hydratase from Glycine max
50% identity, 99% coverage

Tfu_1925 aconitate hydratase 1 from Thermobifida fusca YX
Q47NL1 Aconitate hydratase from Thermobifida fusca (strain YX)
51% identity, 95% coverage

Smed_3083 aconitate hydratase from Sinorhizobium medicae WSM419
51% identity, 98% coverage

SMc03846 PROBABLE ACONITATE HYDRATASE PROTEIN from Sinorhizobium meliloti 1021
52% identity, 98% coverage

D7TEL2 Aconitate hydratase from Vitis vinifera
LOC100256776 aconitate hydratase, cytoplasmic from Vitis vinifera
50% identity, 99% coverage

Q6YZX6 Putative aconitate hydratase, cytoplasmic from Oryza sativa subsp. japonica
50% identity, 99% coverage

ACO1 / Q42560 aconitase from Arabidopsis thaliana (see paper)
ACO1_ARATH / Q42560 Aconitate hydratase 1; Aconitase 1; Citrate hydro-lyase 1; EC 4.2.1.3 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
Q42560 aminocyclopropanecarboxylate oxidase (EC 1.14.17.4) from Arabidopsis thaliana (see paper)
NP_195308 aconitase 1 from Arabidopsis thaliana
AT4G35830, NP_195308 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO) from Arabidopsis thaliana
50% identity, 99% coverage

CA51_26170, Mal33_51990 aconitate hydratase AcnA from Rosistilla oblonga
52% identity, 98% coverage

LOC100253811 aconitate hydratase, cytoplasmic from Vitis vinifera
50% identity, 97% coverage

LOC100242027 aconitate hydratase 1 from Vitis vinifera
49% identity, 99% coverage

F2DCZ4 Aconitate hydratase from Hordeum vulgare subsp. vulgare
50% identity, 97% coverage

D3GQL1 aconitate hydratase (EC 4.2.1.3) from Citrus clementina (see paper)
50% identity, 99% coverage

ACO2M_ARATH / Q94A28 Aconitate hydratase 2, mitochondrial; Aconitase 2; mACO2; Citrate hydro-lyase 2; EC 4.2.1.3 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
AT4G26970, NP_567763 aconitase 2 from Arabidopsis thaliana
NP_567763 aconitate hydratase/ copper ion binding from Arabidopsis thaliana
49% identity, 98% coverage

B9T2U5 Aconitate hydratase from Ricinus communis
51% identity, 96% coverage

ABO_0694 aconitate hydratase from Alcanivorax borkumensis SK2
52% identity, 98% coverage

LOC107825601 aconitate hydratase, cytoplasmic from Nicotiana tabacum
50% identity, 98% coverage

PputW619_1631 aconitate hydratase from Pseudomonas putida W619
53% identity, 98% coverage

PP2112, PP_2112 aconitate hydratase 1 from Pseudomonas putida KT2440
52% identity, 98% coverage

M8CZ57 Aconitate hydratase from Aegilops tauschii
50% identity, 98% coverage

Q1KSB0 Aconitate hydratase from Sorghum bicolor
49% identity, 98% coverage

ESA_01574 hypothetical protein from Enterobacter sakazakii ATCC BAA-894
51% identity, 99% coverage

JHW33_RS04170 aconitate hydratase AcnA from Rahnella aceris
50% identity, 97% coverage

CA54_47570 aconitate hydratase AcnA from Symmachiella macrocystis
52% identity, 95% coverage

XP_044405132 putative aconitate hydratase, cytoplasmic from Triticum aestivum
50% identity, 98% coverage

LOC100304315 uncharacterized protein LOC100304315 from Zea mays
49% identity, 99% coverage

acn / O53166 aconitase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
ACNA_MYCTU / O53166 Aconitate hydratase A; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; Iron-responsive protein-like; IRP-like; Probable 2-methyl-cis-aconitate hydratase; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
Rv1475c aconitate hydratase from Mycobacterium tuberculosis H37Rv
NP_215991 iron-regulated aconitate hydratase from Mycobacterium tuberculosis H37Rv
Mb1511c PROBABLE ACONITATE HYDRATASE ACN (Citrate hydro-lyase) (Aconitase) from Mycobacterium bovis AF2122/97
50% identity, 97% coverage

SAMCCGM7_Ch3507 aconitate hydratase AcnA from Sinorhizobium americanum CCGM7
51% identity, 98% coverage

PFL_1929 aconitate hydratase 1 from Pseudomonas fluorescens Pf-5
Q4KFD5 Aconitate hydratase from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
52% identity, 98% coverage

PSHAa0159 aconitate hydratase (likely to be used in stationary phase); likely to have a 4Fe-4S cluster from Pseudoalteromonas haloplanktis TAC125
51% identity, 97% coverage

MAP1201c aconitate hydratase from Mycobacterium avium subsp. paratuberculosis str. k10
50% identity, 98% coverage

G7JYQ8 Aconitate hydratase from Medicago truncatula
50% identity, 99% coverage

M1CTR3 Aconitate hydratase from Solanum tuberosum
49% identity, 98% coverage

Q10S34 Aconitate hydratase from Oryza sativa subsp. japonica
49% identity, 99% coverage

Pan258_21500 aconitate hydratase AcnA from Symmachiella dynata
52% identity, 95% coverage

MAV_3303 aconitate hydratase from Mycobacterium avium 104
50% identity, 98% coverage

D3GQL0 aconitate hydratase (EC 4.2.1.3) from Citrus clementina (see paper)
50% identity, 98% coverage

Mal52_21950 aconitate hydratase AcnA from Symmachiella dynata
51% identity, 95% coverage

FZF21_20425 aconitate hydratase AcnA from Enterobacter sp. LU1
51% identity, 99% coverage

LT988_17115 aconitate hydratase AcnA from Thiocapsa bogorovii
51% identity, 98% coverage

D3GQL2 aconitate hydratase (EC 4.2.1.3) from Citrus clementina (see paper)
50% identity, 99% coverage

acnA / Q8ZP52 aconitate hydratase 1 (EC 4.2.1.99) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
ACNA_SALTY / Q8ZP52 Aconitate hydratase A; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; 2-methyl-cis-aconitate hydratase; Iron-responsive protein-like; IRP-like; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
STM1712 aconitate hydratase 1 from Salmonella typhimurium LT2
NP_460671 aconitate hydratase 1 from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
51% identity, 99% coverage

P792_14035 aconitate hydratase AcnA from Asaia sp. SF2.1
50% identity, 97% coverage

Q8Z7D2 Aconitate hydratase from Salmonella typhi
t1625 aconitate hydratase 1 from Salmonella enterica subsp. enterica serovar Typhi Ty2
51% identity, 99% coverage

UH47_06710 aconitate hydratase AcnA from Staphylococcus pseudintermedius
51% identity, 99% coverage

GSU0846 aconitate hydratase 1 from Geobacter sulfurreducens PCA
53% identity, 97% coverage

Oant_0105 aconitate hydratase 1 from Ochrobactrum anthropi ATCC 49188
52% identity, 97% coverage

BS1330_I0093 aconitate hydratase AcnA from Brucella suis 1330
51% identity, 98% coverage

Mmah_0478 aconitase from Methanohalophilus mahii DSM 5219
50% identity, 97% coverage

RLV_6777 aconitate hydratase AcnA from Rhizobium leguminosarum bv. viciae
50% identity, 98% coverage

ACIAD3090 aconitate hydratase 1 from Acinetobacter sp. ADP1
51% identity, 98% coverage

BAB1_0090 Aconitate hydratase, C-terminal:Aconitate hydratase, N-terminal:Aconitate hydratase 1 from Brucella melitensis biovar Abortus 2308
51% identity, 98% coverage

BMEI1855 ACONITATE HYDRATASE from Brucella melitensis 16M
51% identity, 98% coverage

lpl1653 Aconitate hydratase from Legionella pneumophila str. Lens
50% identity, 98% coverage

ACON_LEGPH / P37032 Aconitate hydratase A; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; IP210; Iron-responsive protein-like; IRP-like; Major iron-containing protein; MICP; Probable 2-methyl-cis-aconitate hydratase; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) (see paper)
lpg1690 aconitate hydratase from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
51% identity, 98% coverage

BQ01090 Aconitate hydratase from Bartonella quintana str. Toulouse
50% identity, 97% coverage

SACE_3811 aconitate hydratase from Saccharopolyspora erythraea NRRL 2338
50% identity, 95% coverage

BH2299 aconitate hydratase from Bacillus halodurans C-125
50% identity, 98% coverage

DJ41_1103 aconitate hydratase AcnA from Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
50% identity, 99% coverage

SERP0921 aconitate hydratase from Staphylococcus epidermidis RP62A
Q5HPJ0 Aconitate hydratase A from Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
50% identity, 97% coverage

FRAAL2064 aconitate hydratase 1 from Frankia alni ACN14a
51% identity, 95% coverage

lpp1659 Aconitate hydratase from Legionella pneumophila str. Paris
50% identity, 98% coverage

RL4536 putative aconitate hydratase from Rhizobium leguminosarum bv. viciae 3841
50% identity, 98% coverage

PA14_44290 aconitate hydratase 1 from Pseudomonas aeruginosa UCBPP-PA14
51% identity, 98% coverage

IYO_RS10265 aconitate hydratase AcnA from Pseudomonas syringae pv. actinidiae ICMP 18884
52% identity, 98% coverage

MPAO1_17965, PAK_03790 aconitate hydratase AcnA from Pseudomonas aeruginosa PAK
Q9I3F5 Aconitate hydratase A from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PA1562 aconitate hydratase 1 from Pseudomonas aeruginosa PAO1
51% identity, 98% coverage

IX87_RS16955 aconitate hydratase AcnA from Acinetobacter baumannii
50% identity, 99% coverage

SXYL_01534 aconitate hydratase AcnA from Staphylococcus xylosus
51% identity, 98% coverage

Q39WW6 Aconitate hydratase from Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)
52% identity, 97% coverage

Psyr_3404 Aconitate hydratase 1 from Pseudomonas syringae pv. syringae B728a
52% identity, 98% coverage

ABUW_3346 aconitate hydratase AcnA from Acinetobacter baumannii
50% identity, 99% coverage

PLES_37671 aconitate hydratase 1 from Pseudomonas aeruginosa LESB58
51% identity, 98% coverage

Atu2685 aconitate hydratase from Agrobacterium tumefaciens str. C58 (Cereon)
50% identity, 98% coverage

WP_042362767 aconitate hydratase AcnA from Staphylococcus xylosus
51% identity, 98% coverage

B9DP54 Aconitate hydratase from Staphylococcus carnosus (strain TM300)
51% identity, 98% coverage

CLIBASIA_01680 aconitate hydratase from Candidatus Liberibacter asiaticus str. psy62
47% identity, 99% coverage

NCLIV_046260 Iron regulatory protein-like protein, related from Neospora caninum Liverpool
48% identity, 99% coverage

YPTB2143 aconitate hydratase 1 from Yersinia pseudotuberculosis IP 32953
50% identity, 97% coverage

XAC1882 aconitase from Xanthomonas axonopodis pv. citri str. 306
51% identity, 97% coverage

XP_001451848 uncharacterized protein from Paramecium tetraurelia
49% identity, 97% coverage

Swit_2731 aconitase from Sphingomonas wittichii RW1
50% identity, 98% coverage

DDB_G0279159 aconitate hydratase from Dictyostelium discoideum AX4
50% identity, 97% coverage

BC33_RS15515 aconitate hydratase AcnA from Escherichia coli ATCC 700728
ECs1849 aconitate hydrase 1 from Escherichia coli O157:H7 str. Sakai
51% identity, 97% coverage

EIO_1377, KVH_06620, KVU_0869, KvSKV_06590 aconitate hydratase AcnA from Ketogulonicigenium vulgare WSH-001
50% identity, 98% coverage

UTI89_C1547 aconitate hydratase 1 from Escherichia coli UTI89
50% identity, 99% coverage

Acn / b1276 aconitate hydratase 1 from Escherichia coli K-12 substr. MG1655 (see 16 papers)
acnA / P25516 aconitate hydratase 1 from Escherichia coli (strain K12) (see 15 papers)
ACNA_ECOLI / P25516 Aconitate hydratase A; ACN; Aconitase; Iron-responsive protein-like; IRP-like; RNA-binding protein; Stationary phase enzyme; EC 4.2.1.3 from Escherichia coli (strain K12) (see 12 papers)
P25516 aconitate hydratase (EC 4.2.1.3) from Escherichia coli (see paper)
acnA aconitate hydratase 1; EC 4.2.1.3 from Escherichia coli K12 (see 6 papers)
b1276 aconitate hydratase from Escherichia coli str. K-12 substr. MG1655
NP_415792 aconitate hydratase 1 from Escherichia coli str. K-12 substr. MG1655
50% identity, 99% coverage

XP_002765934 aconitase, putative from Perkinsus marinus ATCC 50983
50% identity, 96% coverage

y2063 aconitate hydrase 1 from Yersinia pestis KIM
50% identity, 97% coverage

A0QX20 Aconitate hydratase A from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
MSMEG_3143 aconitate hydratase 1 from Mycobacterium smegmatis str. MC2 155
MSMEG_3143, MSMEI_3062 aconitate hydratase from Mycolicibacterium smegmatis MC2 155
49% identity, 97% coverage

P63434 Aconitate hydratase A from Staphylococcus aureus (strain MW2)
SA1184 aconitate hydratase from Staphylococcus aureus subsp. aureus N315
SAV1350 aconitate hydratase from Staphylococcus aureus subsp. aureus Mu50
SAOUHSC_01347 aconitate hydratase 1 from Staphylococcus aureus subsp. aureus NCTC 8325
SAUSA300_1246 aconitate hydratase from Staphylococcus aureus subsp. aureus USA300_FPR3757
NWMN_1263 aconitate hydratase from Staphylococcus aureus subsp. aureus str. Newman
SACOL1385 aconitate hydratase from Staphylococcus aureus subsp. aureus COL
SAFDA_1246 aconitate hydratase AcnA from Staphylococcus aureus
49% identity, 98% coverage

Hlac_3040 aconitate hydratase 1 from Halorubrum lacusprofundi ATCC 49239
51% identity, 97% coverage

DA471_RS02880 aconitate hydratase AcnA from Staphylococcus aureus
49% identity, 98% coverage

Q6GH55 Aconitate hydratase A from Staphylococcus aureus (strain MRSA252)
49% identity, 98% coverage

ACNA_CORGL / Q8NQ98 Aconitate hydratase A; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; Iron-responsive protein-like; IRP-like; Probable 2-methyl-cis-aconitate hydratase; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534) (see 5 papers)
NCgl1482 aconitate hydratase from Corynebacterium glutamicum ATCC 13032
47% identity, 98% coverage

cg1737 aconitate hydratase from Corynebacterium glutamicum ATCC 13032
47% identity, 98% coverage

LINJ_18_0510 putative aconitase from Leishmania infantum JPCM5
49% identity, 99% coverage

T303_07285 aconitate hydratase AcnA from Streptococcus thermophilus ASCC 1275
49% identity, 98% coverage

D9QAH4 Aconitate hydratase from Corynebacterium pseudotuberculosis (strain C231)
48% identity, 95% coverage

HVO_0541 aconitate hydratase 1 from Haloferax volcanii DS2
50% identity, 98% coverage

MAB_2730 Probable aconitate hydratase ACN from Mycobacterium abscessus ATCC 19977
49% identity, 96% coverage

CpC231_1074 aconitate hydratase AcnA from Corynebacterium pseudotuberculosis C231
48% identity, 95% coverage

XP_001016756 cytoplasmic-like aconitate hydratase from Tetrahymena thermophila SB210
49% identity, 98% coverage

ZP_02144175 aconitate hydratase from Phaeobacter gallaeciensis BS107
47% identity, 97% coverage

E6P09_05600 aconitate hydratase AcnA from Haloferax mediterranei ATCC 33500
50% identity, 97% coverage

E2566_12300 aconitate hydratase AcnA from Pectobacterium punjabense
50% identity, 97% coverage

GOX1335 Aconitate hydratase from Gluconobacter oxydans 621H
50% identity, 97% coverage

FTN_1623 aconitate hydratase from Francisella tularensis subsp. novicida U112
50% identity, 97% coverage

Q5NII1 Aconitate hydratase from Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
FTT_0087 aconitate hydratase from Francisella tularensis subsp. tularensis SCHU S4
50% identity, 97% coverage

SAV_2258 aconitate hydratase from Streptomyces avermitilis MA-4680
50% identity, 95% coverage

FTH_1708 aconitate hydratase from Francisella tularensis subsp. holarctica OSU18
Q2A1K3 Aconitate hydratase A from Francisella tularensis subsp. holarctica (strain LVS)
FTL_1772 aconitate hydratase from Francisella tularensis subsp. holarctica
50% identity, 97% coverage

SCO5999 aconitate hydratase from Streptomyces coelicolor A3(2)
50% identity, 95% coverage

ACNA_STRVT / D9X0I3 Aconitate hydratase A; ACN; Aconitase; EC 4.2.1.3 from Streptomyces viridochromogenes (strain DSM 40736 / JCM 4977 / BCRC 1201 / Tue 494) (see 5 papers)
50% identity, 95% coverage

ACOHC_CAEEL / Q23500 Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Gex-3-interacting protein 22; EC 4.2.1.3 from Caenorhabditis elegans (see 2 papers)
Q23500 aconitate hydratase (EC 4.2.1.3) from Caenorhabditis elegans (see paper)
NP_509898 Cytoplasmic aconitate hydratase from Caenorhabditis elegans
48% identity, 95% coverage

Q9RIL1 aconitate hydratase (EC 4.2.1.3) from Streptomyces viridochromogenes (see paper)
50% identity, 95% coverage

TP01_1050, TpMuguga_01g01050 aconitate hydratase 1 from Theileria parva strain Muguga
50% identity, 98% coverage

ADL12_38700 aconitate hydratase AcnA from Streptomyces regalis
50% identity, 95% coverage

FHQ18_06070 aconitate hydratase AcnA from Deferribacter autotrophicus
47% identity, 95% coverage

Q0S0G5 Aconitate hydratase from Rhodococcus jostii (strain RHA1)
48% identity, 96% coverage

XP_003357777 cytoplasmic aconitate hydratase from Sus scrofa
47% identity, 97% coverage

SSU1042 aconitate hydratase from Streptococcus suis P1/7
SSUSC84_RS05690 aconitate hydratase AcnA from Streptococcus suis SC84
48% identity, 97% coverage

DIP1283 aconitate hydratase from Corynebacterium diphtheriae NCTC 13129
47% identity, 95% coverage

PFCIRM121_08300, PFCIRM129_04640 aconitate hydratase AcnA from Propionibacterium freudenreichii
50% identity, 97% coverage

SMU_RS03175 aconitate hydratase AcnA from Streptococcus mutans UA159
49% identity, 96% coverage

A1S_0558 aconitate hydratase 1 from Acinetobacter baumannii ATCC 17978
52% identity, 90% coverage

Q8VDC3 Cytoplasmic aconitate hydratase from Mus musculus
47% identity, 95% coverage

B9UNL8 Cytoplasmic aconitase/iron-regulatory protein from Ixodes ricinus
49% identity, 98% coverage

2b3xA / P21399 Structure of an orthorhombic crystal form of human cytosolic aconitase (irp1) (see paper)
47% identity, 95% coverage

ACO1 / P21399 cytoplasmic aconitate hydratase from Homo sapiens (see 6 papers)
ACOHC_HUMAN / P21399 Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Ferritin repressor protein; Iron regulatory protein 1; IRP1; Iron-responsive element-binding protein 1; IRE-BP 1; EC 4.2.1.3 from Homo sapiens (Human) (see 8 papers)
P21399 aconitate hydratase (EC 4.2.1.3) from Homo sapiens (see 3 papers)
NP_001265281 cytoplasmic aconitate hydratase from Homo sapiens
NP_002188 cytoplasmic aconitate hydratase from Homo sapiens
47% identity, 95% coverage

NP_001147431 aconitase 2 isoform 1 from Zea mays
B6SRL2 Aconitate hydratase from Zea mays
46% identity, 99% coverage

ETH_00020300 uncharacterized protein from Eimeria tenella
48% identity, 97% coverage

BAD_RS05595 aconitate hydratase AcnA from Bifidobacterium adolescentis ATCC 15703
48% identity, 97% coverage

I3LJW4 Cytoplasmic aconitate hydratase from Sus scrofa
49% identity, 90% coverage

TA17020 iron-responsive element binding protein/aconitase, putative from Theileria annulata
51% identity, 91% coverage

ACOHC_MOUSE / P28271 Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Iron regulatory protein 1; IRP1; Iron-responsive element-binding protein 1; IRE-BP 1; EC 4.2.1.3 from Mus musculus (Mouse) (see paper)
P28271 aconitate hydratase (EC 4.2.1.3) from Mus musculus (see paper)
NP_031412 cytoplasmic aconitate hydratase from Mus musculus
48% identity, 95% coverage

NP_059017 cytoplasmic aconitate hydratase from Rattus norvegicus
48% identity, 95% coverage

XP_008251386 cytoplasmic aconitate hydratase isoform X1 from Oryctolagus cuniculus
47% identity, 97% coverage

BBOV_III011790 aconitate hydratase 1 family protein from Babesia bovis T2Bo
48% identity, 98% coverage

R0J775 Cytoplasmic aconitate hydratase (Fragment) from Anas platyrhynchos
48% identity, 95% coverage

BBM_III04870 aconitate hydratase 1 from Babesia microti strain RI
47% identity, 97% coverage

ACOHC_RABIT / Q01059 Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Ferritin repressor protein; Iron regulatory protein 1; IRP1; Iron-responsive element-binding protein 1; IRE-BP 1; EC 4.2.1.3 from Oryctolagus cuniculus (Rabbit) (see paper)
47% identity, 97% coverage

NP_477371 iron regulatory protein 1A from Drosophila melanogaster
47% identity, 98% coverage

Q9NFX3 aconitate hydratase (EC 4.2.1.3) from Drosophila melanogaster (see paper)
47% identity, 98% coverage

NP_524303 iron regulatory protein 1B from Drosophila melanogaster
47% identity, 98% coverage

Q9NFX2 aconitate hydratase (EC 4.2.1.3) from Drosophila melanogaster (see paper)
47% identity, 98% coverage

ACOHC_BOVIN / Q0VCU1 Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Iron-responsive element-binding protein 1; IRE-BP 1; EC 4.2.1.3 from Bos taurus (Bovine) (see paper)
47% identity, 95% coverage

W5PZ94 Cytoplasmic aconitate hydratase from Ovis aries
47% identity, 95% coverage

Tneu_0614 aconitate hydratase from Thermoproteus neutrophilus V24Sta
48% identity, 97% coverage

Q90875 Cytoplasmic aconitate hydratase from Gallus gallus
47% identity, 95% coverage

ACOHC_RAT / Q63270 Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Iron regulatory protein 1; IRP1; Iron-responsive element-binding protein 1; IRE-BP 1; EC 4.2.1.3 from Rattus norvegicus (Rat) (see paper)
Q63270 aconitate hydratase (EC 4.2.1.3) from Rattus norvegicus (see paper)
47% identity, 95% coverage

ETH_00025665 aconitate hydratase, putative from Eimeria tenella
46% identity, 98% coverage

S101446_02412 aconitate hydratase AcnA from Komagataeibacter europaeus
46% identity, 98% coverage

PVX_083005 aconitate hydratase I, putative from Plasmodium vivax
45% identity, 98% coverage

APA386B_1323 aconitate hydratase AcnA from Acetobacter pasteurianus 386B
C7JG48 Aconitate hydratase from Acetobacter pasteurianus (strain NBRC 105184 / IFO 3283-01)
46% identity, 98% coverage

PF3D7_1342100, XP_001350142 aconitate hydratase from Plasmodium falciparum 3D7
44% identity, 97% coverage

PBANKA_135520 aconitate hydratase, putative from Plasmodium berghei ANKA
43% identity, 99% coverage

G3V6S2 Cytoplasmic aconitate hydratase from Rattus norvegicus
46% identity, 95% coverage

AL01_06260 aconitate hydratase AcnA from Bombella intestini
48% identity, 97% coverage

Q9HBB2 Cytoplasmic aconitate hydratase from Homo sapiens
47% identity, 88% coverage

pmi / A0A0M3N196 phosphinomethylmalate isomerase (EC 4.2.1.166) from Kitasatospora phosalacinea (see 2 papers)
47% identity, 95% coverage

3snpA / Q01059 Crystal structure analysis of iron regulatory protein 1 in complex with ferritin h ire RNA (see paper)
45% identity, 97% coverage

G3HQZ8 Cytoplasmic aconitate hydratase from Cricetulus griseus
45% identity, 95% coverage

EDI29_04400 aconitate hydratase AcnA from Pectobacterium polonicum
44% identity, 97% coverage

pmi / Q5IW57 phosphinomethylmalate isomerase (EC 4.2.1.166) from Streptomyces viridochromogenes (see paper)
PMI_STRVT / D9XF46 Phosphinomethylmalate isomerase; EC 4.2.1.166 from Streptomyces viridochromogenes (strain DSM 40736 / JCM 4977 / BCRC 1201 / Tue 494) (see paper)
45% identity, 97% coverage

ELEN_RS11710 aconitate hydratase AcnA from Eggerthella lenta DSM 2243
44% identity, 98% coverage

Q4JFF1 phosphinomethylmalate isomerase (EC 4.2.1.166) from Streptomyces viridochromogenes (see paper)
44% identity, 97% coverage

FAD_0701 aconitate hydratase AcnA from Ferroplasma acidiphilum
43% identity, 96% coverage

C0HER4 Aconitate hydratase from Zea mays
48% identity, 77% coverage

VC1338 aconitate hydratase 1 from Vibrio cholerae O1 biovar eltor str. N16961
41% identity, 94% coverage

IREB2_HUMAN / P48200 Iron-responsive element-binding protein 2; IRE-BP 2; Iron regulatory protein 2; IRP2 from Homo sapiens (Human) (see 6 papers)
NP_004127 iron-responsive element-binding protein 2 isoform 1 from Homo sapiens
44% identity, 84% coverage

IREB2_MOUSE / Q811J3 Iron-responsive element-binding protein 2; IRE-BP 2; Iron regulatory protein 2; IRP2 from Mus musculus (Mouse) (see paper)
44% identity, 84% coverage

BAU10_07690 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Vibrio alginolyticus
42% identity, 94% coverage

VP1646 aconitate hydratase 1 from Vibrio parahaemolyticus RIMD 2210633
VP_RS07925 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Vibrio parahaemolyticus RIMD 2210633
42% identity, 94% coverage

MIM_c31340 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Advenella mimigardefordensis DPN7
41% identity, 95% coverage

H16_A1907 Methyl-cis-aconitic acid hydratase/Aconitate hydratase from Ralstonia eutropha H16
41% identity, 95% coverage

ACNA_CUPNE / Q937N8 Aconitate hydratase A; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; Iron-responsive protein-like; IRP-like; Probable 2-methyl-cis-aconitate hydratase; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Cupriavidus necator (Alcaligenes eutrophus) (Ralstonia eutropha) (see paper)
41% identity, 94% coverage

ACIAD2755 aconitate hydratase 1 from Acinetobacter sp. ADP1
42% identity, 95% coverage

Smlt3608 putative aconitate hydratase from Stenotrophomonas maltophilia K279a
41% identity, 95% coverage

Hsero_2283 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Herbaspirillum seropedicae SmR1
41% identity, 95% coverage

PA14_53970 probable aconitate hydratase from Pseudomonas aeruginosa UCBPP-PA14
41% identity, 95% coverage

PA0794 probable aconitate hydratase from Pseudomonas aeruginosa PAO1
41% identity, 95% coverage

NMA2052 aconitate hydratase from Neisseria meningitidis Z2491
41% identity, 97% coverage

NMB0433 aconitate hydratase from Neisseria meningitidis MC58
41% identity, 97% coverage

VT47_09995 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Pseudomonas syringae pv. syringae
40% identity, 95% coverage

GY20_RS0107915 aconitate hydratase from Corynebacterium glutamicum
46% identity, 70% coverage

BUE60_12810 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Pseudomonas syringae pv. actinidiae
40% identity, 95% coverage

PP_2336 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Pseudomonas putida KT2440
PP2336 aconitate hydratase, putative from Pseudomonas putida KT2440
40% identity, 95% coverage

FQU82_00161 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Acinetobacter baumannii
ACICU_00101 aconitase A from Acinetobacter baumannii ACICU
40% identity, 95% coverage

RSUY_RS17195 aconitate hydratase AcnA from Ralstonia solanacearum
40% identity, 94% coverage

XCV1158 aconitate hydratase from Xanthomonas campestris pv. vesicatoria str. 85-10
39% identity, 95% coverage

BOW65_RS08625 Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Pseudomonas koreensis
39% identity, 95% coverage

PFLU4630 aconitate hydratase from Pseudomonas fluorescens SBW25
39% identity, 95% coverage

O04916 Aconitate hydratase, cytoplasmic (Fragment) from Solanum tuberosum
46% identity, 70% coverage

XP_006511398 iron-responsive element-binding protein 2 isoform X1 from Mus musculus
48% identity, 51% coverage

LLKF_0647 aconitate hydratase from Lactococcus lactis subsp. lactis KF147
50% identity, 50% coverage

llmg_0636 aconitate hydratase from Lactococcus lactis subsp. cremoris MG1363
49% identity, 50% coverage

Rmet_4240 aconitate hydratase AcnA from Cupriavidus metallidurans CH34
Rmet_4240 aconitate hydratase 1 from Ralstonia metallidurans CH34
48% identity, 55% coverage

C4J6M5 Aconitate hydratase 3 mitochondrial from Zea mays
41% identity, 64% coverage

ST0833 855aa long hypothetical aconitate hydratase from Sulfolobus tokodaii str. 7
47% identity, 51% coverage

SiRe_1005 aconitate hydratase AcnA from Sulfolobus islandicus REY15A
48% identity, 51% coverage

acnD / Q8EJW3 2-methylcitrate dehydratase (EC 4.2.1.117) from Shewanella oneidensis (strain MR-1) (see paper)
ACND_SHEON / Q8EJW3 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; ACN; Aconitase; EC 4.2.1.117; EC 4.2.1.3 from Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) (see paper)
Q8EJW3 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117) from Shewanella oneidensis (see paper)
SO0343 aconitate hydratase 1 from Shewanella oneidensis MR-1
45% identity, 52% coverage

A1S_0076 aconitate hydratase from Acinetobacter baumannii ATCC 17978
46% identity, 52% coverage

ABO_1431 aconitate hydratase, putative from Alcanivorax borkumensis SK2
44% identity, 50% coverage

Bcep1808_3678 aconitate hydratase from Burkholderia vietnamiensis G4
A4JK60 2-methylcitrate dehydratase (Trans-methylaconitate-forming) from Burkholderia vietnamiensis (strain G4 / LMG 22486)
46% identity, 50% coverage

New Search

For advice on how to use these tools together, see Interactive tools for functional annotation of bacterial genomes.

Statistics

The PaperBLAST database links 784,739 different protein sequences to 1,253,012 scientific articles. Searches against EuropePMC were last performed on November 25 2024.

How It Works

PaperBLAST builds a database of protein sequences that are linked to scientific articles. These links come from automated text searches against the articles in EuropePMC and from manually-curated information from GeneRIF, UniProtKB/Swiss-Prot, BRENDA, CAZy (as made available by dbCAN), BioLiP, CharProtDB, MetaCyc, EcoCyc, TCDB, REBASE, the Fitness Browser, and a subset of the European Nucleotide Archive with the /experiment tag. Given this database and a protein sequence query, PaperBLAST uses protein-protein BLAST to find similar sequences with E < 0.001.

To build the database, we query EuropePMC with locus tags, with RefSeq protein identifiers, and with UniProt accessions. We obtain the locus tags from RefSeq or from MicrobesOnline. We use queries of the form "locus_tag AND genus_name" to try to ensure that the paper is actually discussing that gene. Because EuropePMC indexes most recent biomedical papers, even if they are not open access, some of the links may be to papers that you cannot read or that our computers cannot read. We query each of these identifiers that appears in the open access part of EuropePMC, as well as every locus tag that appears in the 500 most-referenced genomes, so that a gene may appear in the PaperBLAST results even though none of the papers that mention it are open access. We also incorporate text-mined links from EuropePMC that link open access articles to UniProt or RefSeq identifiers. (This yields some additional links because EuropePMC uses different heuristics for their text mining than we do.)

For every article that mentions a locus tag, a RefSeq protein identifier, or a UniProt accession, we try to select one or two snippets of text that refer to the protein. If we cannot get access to the full text, we try to select a snippet from the abstract, but unfortunately, unique identifiers such as locus tags are rarely provided in abstracts.

PaperBLAST also incorporates manually-curated protein functions:

Except for GeneRIF and ENA, the curated entries include a short curated description of the protein's function. For entries from BioLiP, the protein's function may not be known beyond binding to the ligand. Many of these entries also link to articles in PubMed.

For more information see the PaperBLAST paper (mSystems 2017) or the code. You can download PaperBLAST's database here.

Changes to PaperBLAST since the paper was written:

Many of these changes are described in Interactive tools for functional annotation of bacterial genomes.

Secrets

PaperBLAST cannot provide snippets for many of the papers that are published in non-open-access journals. This limitation applies even if the paper is marked as "free" on the publisher's web site and is available in PubmedCentral or EuropePMC. If a journal that you publish in is marked as "secret," please consider publishing elsewhere.

Omissions from the PaperBLAST Database

Many important articles are missing from PaperBLAST, either because the article's full text is not in EuropePMC (as for many older articles), or because the paper does not mention a protein identifier such as a locus tag, or because of PaperBLAST's heuristics. If you notice an article that characterizes a protein's function but is missing from PaperBLAST, please notify the curators at UniProt or add an entry to GeneRIF. Entries in either of these databases will eventually be incorporated into PaperBLAST. Note that to add an entry to UniProt, you will need to find the UniProt identifier for the protein. If the protein is not already in UniProt, you can ask them to create an entry. To add an entry to GeneRIF, you will need an NCBI Gene identifier, but unfortunately many prokaryotic proteins in RefSeq do not have corresponding Gene identifers.

References

PaperBLAST: Text-mining papers for information about homologs.
M. N. Price and A. P. Arkin (2017). mSystems, 10.1128/mSystems.00039-17.

Europe PMC in 2017.
M. Levchenko et al (2017). Nucleic Acids Research, 10.1093/nar/gkx1005.

Gene indexing: characterization and analysis of NLM's GeneRIFs.
J. A. Mitchell et al (2003). AMIA Annu Symp Proc 2003:460-464.

UniProt: the universal protein knowledgebase.
The UniProt Consortium (2016). Nucleic Acids Research, 10.1093/nar/gkw1099.

BRENDA in 2017: new perspectives and new tools in BRENDA.
S. Placzek et al (2017). Nucleic Acids Research, 10.1093/nar/gkw952.

The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.
I. M. Keeseler et al (2016). Nucleic Acids Research, 10.1093/nar/gkw1003.

The MetaCyc database of metabolic pathways and enzymes.
R. Caspi et al (2018). Nucleic Acids Research, 10.1093/nar/gkx935.

CharProtDB: a database of experimentally characterized protein annotations.
R. Madupu et al (2012). Nucleic Acids Research, 10.1093/nar/gkr1133.

The carbohydrate-active enzymes database (CAZy) in 2013.
V. Lombard et al (2014). Nucleic Acids Research, 10.1093/nar/gkt1178.

The Transporter Classification Database (TCDB): recent advances
M. H. Saier, Jr. et al (2016). Nucleic Acids Research, 10.1093/nar/gkv1103.

REBASE - a database for DNA restriction and modification: enzymes, genes and genomes.
R. J. Roberts et al (2015). Nucleic Acids Research, 10.1093/nar/gku1046.

Deep annotation of protein function across diverse bacteria from mutant phenotypes.
M. N. Price et al (2016). bioRxiv, 10.1101/072470.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory