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BLAST against PDB

Comparing PDB to 74 a.a. (MNRKQRSIPL...) (74 a.a., MNRKQRSIPL...)

88 hits were found against non-redundant PDB (which was clustered at 80% identity)

2dgc A Gcn4 basic domain, leucine zipper complexed with atf/creb site DNA
98% identity, 84% coverage of query, 120.0 bits, E = 2e-28

8fx4 D Gc-c-hsp90-cdc37 regulatory complex
97% identity, 45% coverage of query, 67.4 bits, E = 2e-12

7t6f C Structure of active janus kinase (jak) dimer complexed with cytokine receptor intracellular domain
97% identity, 45% coverage of query, 67.0 bits, E = 3e-12

8u18 A Cryo-em structure of murine thrombopoietin receptor ectodomain in complex with tpo
97% identity, 45% coverage of query, 67.0 bits, E = 4e-12

1llm C Crystal structure of a zif23-gcn4 chimera bound to DNA
62% identity, 81% coverage of query, 65.9 bits, E = 6e-12

3wkv A Voltage-gated proton channel: vsop/hv1 chimeric channel
47% identity, 88% coverage of query, 65.9 bits, E = 8e-12

1nkn A Visualizing an unstable coiled coil: the crystal structure of an n- terminal segment of the scallop myosin rod
97% identity, 43% coverage of query, 65.1 bits, E = 1e-11

1gk6 A Human vimentin coil 2b fragment linked to gcn4 leucine zipper (z2b)
94% identity, 43% coverage of query, 63.9 bits, E = 3e-11

8ave B Human leptin in complex with the human lep-r ectodomain fused to a c- terminal trimeric isoleucine gcn4 zipper (2:2 model)
76% identity, 45% coverage of query, 61.6 bits, E = 1e-10

5apx A Sequence matkddian inserted between gcn4 adaptors - structure t9(6)
94% identity, 43% coverage of query, 61.2 bits, E = 2e-10

5apx A Sequence matkddian inserted between gcn4 adaptors - structure t9(6)
79% identity, 45% coverage of query, 53.5 bits, E = 4e-08

8avc B Mouse leptin:lep-r complex cryoem structure (3:3 model)
76% identity, 45% coverage of query, 60.8 bits, E = 2e-10

2n9b A Solution nmr structure of antiparallel myosin-10:gcn4 tandem coiled- coil
88% identity, 46% coverage of query, 60.1 bits, E = 4e-10

2r32 A Crystal structure of human gitrl variant
76% identity, 45% coverage of query, 60.1 bits, E = 5e-10

2efr A Crystal structure of thE C-terminal tropomyosin fragment with n- and c-terminal extensions of the leucine zipper at 1.8 angstroms resolution
93% identity, 41% coverage of query, 59.7 bits, E = 5e-10

2efr A Crystal structure of thE C-terminal tropomyosin fragment with n- and c-terminal extensions of the leucine zipper at 1.8 angstroms resolution
90% identity, 41% coverage of query, 57.8 bits, E = 2e-09

6h9m A Coiled-coil domain-containing protein 90b residues 43-125 from homo sapiens fused to a gcn4 adaptor
91% identity, 43% coverage of query, 59.3 bits, E = 7e-10

7saf A Fragment of streptococcal m87 protein fused to gcn4 adaptor
97% identity, 39% coverage of query, 58.5 bits, E = 1e-09

2vky B Headbinding domain of phage p22 tailspikE C-terminally fused to isoleucine zipper piigcn4 (chimera i)
64% identity, 49% coverage of query, 58.2 bits, E = 2e-09

3zmf A Salmonella enterica sada 303-358 fused to gcn4 adaptors (sadak2)
57% identity, 62% coverage of query, 57.8 bits, E = 2e-09

3zmf A Salmonella enterica sada 303-358 fused to gcn4 adaptors (sadak2)
72% identity, 39% coverage of query, 53.1 bits, E = 5e-08

8jlx A Cchfv envelope protein gc in complex with gc13
55% identity, 66% coverage of query, 57.0 bits, E = 3e-09

1ebo A Crystal structure of the ebola virus membrane-fusion subunit, gp2, from the envelope glycoprotein ectodomain
74% identity, 42% coverage of query, 57.0 bits, E = 4e-09

7o92 A Hypothetical protein uy81_c0065g0003 residues 18-54 from candidatus giovannonibacteria bacterium fused to gcn4 adaptors
87% identity, 42% coverage of query, 56.2 bits, E = 5e-09

7o92 A Hypothetical protein uy81_c0065g0003 residues 18-54 from candidatus giovannonibacteria bacterium fused to gcn4 adaptors
70% identity, 54% coverage of query, 53.1 bits, E = 5e-08

1env A Atomic structure of the ectodomain from HIV-1 gp41
74% identity, 42% coverage of query, 56.2 bits, E = 5e-09

1ce0 A Trimerization specificity in HIV-1 gp41: analysis with a gcn4 leucine zipper model
73% identity, 50% coverage of query, 56.2 bits, E = 6e-09

7ki4 A Structure of the niv f glycoprotein in complex with the 12b2 neutralizing antibody
74% identity, 42% coverage of query, 56.2 bits, E = 6e-09

5apz A Thermosinus carboxydivorans nor1 tcar0761 residues 68-101 and 191-211 fused to gcn4 adaptors
87% identity, 42% coverage of query, 55.8 bits, E = 7e-09

5apz A Thermosinus carboxydivorans nor1 tcar0761 residues 68-101 and 191-211 fused to gcn4 adaptors
86% identity, 39% coverage of query, 51.2 bits, E = 2e-07

8uty K Kif1a[1-393] p364l mutant amp-pnp bound two-heads-bound state in complex with a microtubule
90% identity, 39% coverage of query, 55.8 bits, E = 8e-09

8p4y A Coiled-coil protein origami triangle
93% identity, 38% coverage of query, 55.5 bits, E = 1e-08

8p4y A Coiled-coil protein origami triangle
93% identity, 38% coverage of query, 55.5 bits, E = 1e-08

4xc5 A Crystal structure of the t1l reovirus attachment protein sigma1
73% identity, 41% coverage of query, 55.5 bits, E = 1e-08

2xzr A Escherichia coli immunoglobulin-binding protein eibd 391-438 fused to gcn4 adaptors
73% identity, 41% coverage of query, 55.5 bits, E = 1e-08

2xzr A Escherichia coli immunoglobulin-binding protein eibd 391-438 fused to gcn4 adaptors
75% identity, 32% coverage of query, 45.1 bits, E = 1e-05

2b9b A Structure of the parainfluenza virus 5 f protein in its metastable, pre-fusion conformation
47% identity, 77% coverage of query, 55.1 bits, E = 1e-08

6cv0 A Cryo-electron microscopy structure of infectious bronchitis coronavirus spike protein
71% identity, 42% coverage of query, 55.1 bits, E = 1e-08

2wg5 A Proteasome-activating nucleotidase (pan) n-domain (57-134) from archaeoglobus fulgidus fused to gcn4
82% identity, 42% coverage of query, 55.1 bits, E = 1e-08

8tqk A Human parainfluenza virus type 3 prefusion f trimer in complex with rpiv3-18 fab
48% identity, 68% coverage of query, 55.1 bits, E = 1e-08

4g2k A Crystal structure of the marburg virus gp2 ectodomain in its post- fusion conformation
73% identity, 41% coverage of query, 54.7 bits, E = 2e-08

8tvb A Ghanaian virus fusion glycoprotein (ghv f)
74% identity, 42% coverage of query, 54.7 bits, E = 2e-08

6e52 A Chimeric structure of saccharomyces cerevisiae gcn4 leucine zipper fused to staphylococcus aureus agrc cytoplasmic histidine kinase module (dataset anisotropically truncated by staraniso)
93% identity, 36% coverage of query, 54.3 bits, E = 2e-08

4n21 A Crystal structure of the gp2 core domain from the california academy of science virus
73% identity, 41% coverage of query, 54.3 bits, E = 2e-08

2ynz A Salmonella enterica sada 823-947 fused to a gcn4 adaptor (sadak5)
71% identity, 42% coverage of query, 53.9 bits, E = 3e-08

2yo2 A Salmonella enterica sada 255-358 fused to gcn4 adaptors (sadak12)
72% identity, 39% coverage of query, 53.5 bits, E = 4e-08

2yo2 A Salmonella enterica sada 255-358 fused to gcn4 adaptors (sadak12)
56% identity, 55% coverage of query, 51.2 bits, E = 2e-07

3wpo A Acinetobacter sp. Tol 5 ataa ydd-dall3 domains in c-terminal stalk fused to gcn4 adaptors (cstalkc1i)
72% identity, 39% coverage of query, 53.5 bits, E = 4e-08

3wpo A Acinetobacter sp. Tol 5 ataa ydd-dall3 domains in c-terminal stalk fused to gcn4 adaptors (cstalkc1i)
72% identity, 34% coverage of query, 46.6 bits, E = 5e-06

2wpq A Salmonella enterica sada 479-519 fused to gcn4 adaptors (sadak3, in- register fusion)
68% identity, 42% coverage of query, 52.8 bits, E = 6e-08

2wpq A Salmonella enterica sada 479-519 fused to gcn4 adaptors (sadak3, in- register fusion)
72% identity, 39% coverage of query, 52.8 bits, E = 7e-08

3s6x A Structure of reovirus attachment protein sigma1 in complex with alpha- 2,3-sialyllactose
72% identity, 39% coverage of query, 52.8 bits, E = 6e-08

5app A Actinobacillus actinomycetemcomitans omp100 residues 133-198 fused to gcn4 adaptors
72% identity, 39% coverage of query, 52.8 bits, E = 6e-08

5app A Actinobacillus actinomycetemcomitans omp100 residues 133-198 fused to gcn4 adaptors
72% identity, 34% coverage of query, 46.2 bits, E = 7e-06

2wpr A Salmonella enterica sada 483-523 fused to gcn4 adaptors (sadak3b-v1, out-of-register fusion)
72% identity, 39% coverage of query, 52.8 bits, E = 6e-08

2wpr A Salmonella enterica sada 483-523 fused to gcn4 adaptors (sadak3b-v1, out-of-register fusion)
75% identity, 32% coverage of query, 45.4 bits, E = 1e-05

3wp8 A Acinetobacter sp. Tol 5 ataa c-terminal ylhead fused to gcn4 adaptors (chead)
70% identity, 41% coverage of query, 52.8 bits, E = 7e-08

3wp8 A Acinetobacter sp. Tol 5 ataa c-terminal ylhead fused to gcn4 adaptors (chead)
62% identity, 43% coverage of query, 47.4 bits, E = 3e-06

3wpa A Acinetobacter sp. Tol 5 ataa c-terminal stalk_fl fused to gcn4 adaptors (cstalkfl)
72% identity, 39% coverage of query, 52.8 bits, E = 7e-08

2yny A Salmonella enterica sada 255-302 fused to gcn4 adaptors (sadak1)
72% identity, 39% coverage of query, 52.4 bits, E = 8e-08

2yny A Salmonella enterica sada 255-302 fused to gcn4 adaptors (sadak1)
72% identity, 39% coverage of query, 52.4 bits, E = 8e-08

2yo0 A Salmonella enterica sada 1049-1304 fused to gcn4 adaptors (sadak9-cfi)
72% identity, 39% coverage of query, 50.8 bits, E = 3e-07

2yo0 A Salmonella enterica sada 1049-1304 fused to gcn4 adaptors (sadak9-cfi)
50% identity, 58% coverage of query, 45.1 bits, E = 1e-05

1u9f A Heterocyclic peptide backbone modification in gcn4-pli based coiled coils: replacement of k(15)l(16)
73% identity, 45% coverage of query, 50.8 bits, E = 3e-07

1kql A Crystal structure of thE C-terminal region of striated muscle alpha- tropomyosin at 2.7 angstrom resolution
88% identity, 35% coverage of query, 50.1 bits, E = 5e-07

4m8m A Crystal structure of the active dimer of zebrafish plexinc1 cytoplasmic region
89% identity, 38% coverage of query, 49.3 bits, E = 6e-07

1w5j A An anti-parallel four helix bundle
61% identity, 45% coverage of query, 48.9 bits, E = 8e-07

2hy6 A A seven-helix coiled coil
67% identity, 45% coverage of query, 48.5 bits, E = 1e-06

2wq0 A Gcn4 leucine zipper mutant with three ixxntxx motifs coordinating chloride
73% identity, 45% coverage of query, 48.5 bits, E = 1e-06

7o9v A Hypothetical protein omm_04225 residues 244-274 from candidatus magnetoglobus multicellularis fused to gcn4 adaptors
62% identity, 43% coverage of query, 48.5 bits, E = 1e-06

7o9v A Hypothetical protein omm_04225 residues 244-274 from candidatus magnetoglobus multicellularis fused to gcn4 adaptors
71% identity, 38% coverage of query, 46.6 bits, E = 5e-06

7oac A Conserved hypothetical protein residues 311-335 from candidatus magnetomorum sp. Hk-1 fused to gcn4 adaptors, mutant beta1/a, crystal form i
41% identity, 82% coverage of query, 48.1 bits, E = 2e-06

7oac A Conserved hypothetical protein residues 311-335 from candidatus magnetomorum sp. Hk-1 fused to gcn4 adaptors, mutant beta1/a, crystal form i
69% identity, 39% coverage of query, 47.8 bits, E = 2e-06

4c46 A Andrei-n-lvpas fused to gcn4 adaptors
69% identity, 39% coverage of query, 47.8 bits, E = 2e-06

4c46 A Andrei-n-lvpas fused to gcn4 adaptors
66% identity, 39% coverage of query, 46.6 bits, E = 5e-06

2yo3 A Salmonella enterica sada 1185-1386 fused to gcn4 adaptors (sadak14)
72% identity, 39% coverage of query, 47.8 bits, E = 2e-06

2yo3 A Salmonella enterica sada 1185-1386 fused to gcn4 adaptors (sadak14)
72% identity, 34% coverage of query, 42.0 bits, E = 0.0001

3f86 A An alpha/beta-peptide helix bundle with a pure beta-amino acid core and a distinctive quaternary structure: gcn4pli derivative with beta residues at a and d heptad positions
73% identity, 45% coverage of query, 45.8 bits, E = 7e-06

6vsj A Cryo-electron microscopy structure of mouse coronavirus spike protein complexed with its murine receptor
58% identity, 42% coverage of query, 45.4 bits, E = 9e-06

8ohn A Human coronavirus hku1 spike glycoprotein
58% identity, 42% coverage of query, 45.4 bits, E = 9e-06

6mi4 A Structure of the i65m mutant of nemo(51-112) with n- and c-terminal coiled-coil adaptors.
77% identity, 41% coverage of query, 45.4 bits, E = 1e-05

6mi4 A Structure of the i65m mutant of nemo(51-112) with n- and c-terminal coiled-coil adaptors.
69% identity, 39% coverage of query, 39.3 bits, E = 0.0007

3hex A Cyclic residues in alpha/beta-peptide helix bundles: gcn4-pli side chain sequence on an (alpha-alpha-beta) backbone with cyclic beta- residues at positions 1, 4, 19 and 28
62% identity, 43% coverage of query, 43.5 bits, E = 4e-05

5kht A Crystal structure of the n-terminal fragment of tropomyosin isoform tpm1.1 at 1.5 a resolution
70% identity, 36% coverage of query, 42.7 bits, E = 7e-05

1ihq A Glytm1bzip: a chimeric peptide model of the n-terminus of a rat short alpha tropomyosin with the n-terminus encoded by exon 1b
73% identity, 35% coverage of query, 42.7 bits, E = 8e-05

8f3b A HIV-1 gp41 coiled-coil pocket iqn22
63% identity, 41% coverage of query, 42.0 bits, E = 0.0001

2r2v A Sequence determinants of the topology of the lac repressor tetrameric coiled coil
58% identity, 45% coverage of query, 41.6 bits, E = 0.0002

2g9j A Complex of tm1a(1-14)zip with tm9a(251-284): a model for the polymerization domain ("overlap region") of tropomyosin, northeast structural genomics target or9
62% identity, 43% coverage of query, 41.2 bits, E = 0.0002

To find additional similar structures, try the "Find Similar Assemblies" links at RCSB.

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory