PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 349868 (602 amino acids)

SeqID: 349868 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597040: methionine synthase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>349868
MKTWKTNLEETKQRYINWWNHKGIILSMWEHFQEGVKPHADIAPPAPARDLSQKWFDPQW
RAEYLDWYVAHSSLMADMLPVANTQLGPGSLAAILGGVFEGGEDTIWIHPDPNFNDEIVF
NPEHPNWLLHKELLKACKAKANGNYFVGMPDLMEGLDVLAALKGTDMVLLDTVMQSEVLE
QQMQQINDIYFKVFDELYDIIREGDEMAFCYFSSWAPGKMSKLQSDISTMISQDDYRRFV
QPFIREQCQKIDYTLYHLDGVGAMHHLPALLEIEELNAIQWTPGVGEPQGGSPKWYDLYK
KILAGGKSVMACWVTLEELKPLLDHIGADGVHLEMDFHNEREVEQAMRIIEEYTGSSSSV
SADVHTNQPVGEQDNAQESIRIREEKSQEEDRMKPLYDAIVAGKLEPAVEVTKDAIAAGV
LPQDIINGYMITAMGEVGQRFQDGKAFVPQLLMAGRAMKGALELLKPLLAGNASATIGKI
VIGTVKGDLHDIGKNLVASMLEGCGFEVINIGIDVTCDKFVEAVKENKADILCMSALLTT
TMTYMQDVIRALEEAGIRDQVKVMIGGAPVSQGFADEIGADGYSDNANTAVAVAKVLMGK
RD