PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 350650 (384 amino acids)

SeqID: 350650 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Periplasmic                   [matched 15599399: periplasmic gluconolactonase, PpgL[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Periplasmic            9.44
    Cytoplasmic            0.33
    Extracellular          0.11
    CytoplasmicMembrane    0.06
    OuterMembrane          0.06
  Final Prediction:
    Periplasmic            9.44

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>350650
MKPKALFVMLILWLSFTTIQARSTEDVPDKGTYAKFLLVGCYMKPDEEGVRMYRFDGQTA
DVDYPCGLRGISNPAFLTSDSTGNRIYAIGDDEGKSSTANALLFDKESGLLSLLNSQSTD
GELPIYITLSPKEYFVLTANYKGGSITVFSQDKKGKLQRDTKIIRFAGNGPNKKRQEQSH
LHCVTFTPDGKFLLATDLGTDCIYLFPIGKRPEAGKAHSLLDESRVVRIQMDSGSGPRHI
CFHPNGRFAYLISELSGKITVFSYNEGKLERLQTIVCDPFVAEGNADIHVSSDGKFLYAS
KHLKEDGIIVYSIDSQKGTLVQIGFQPTGLYPRSFAISPDGCYLAVVCRDANCIQIFERN
RNTGLLKNTGKNIRLERPAFVKFL