PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 351598 (434 amino acids)

SeqID: 351598 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 3123196: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>351598
MKEATRIDNELFPKFDVKRGLRNEDGTGVLVGLTKIGNVVGYERIPGGGLKPIPGKLFYR
GYDVEDISHAIIKEKRFGFEEVAYLLLSGRLPDKEELASFRELINDNMALEQKTKMNIIE
LEGNNIMNILSRSVLEMYRFDPDADDTSRDNLMRQSIDLISKFPTIIAYAYNMLRHATFG
RSLHIRHPQEKLSIAENFLYMLKKDYTELDARTLDLLLILQAEHGGGNNSTFTVRVTSST
GTDTYSAIAAGIGSLKGPLHGGANIQVADMFHHLQENIKDWKSVDEIDTYFTRMLNKEVY
NKTGLIYGIGHAVYTISDPRALLLKELARDLAREKGKEEEFAFLELLEERAIATFGRVKN
NGKTVSSNIDFYSGFVYEMIGLPQEIFTPLFAMARIVGWCAHRNEELNFEGKRIIRPAYK
NVLDDLAYIPIKKR