PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 3607885 (606 amino acids)

SeqID: 3607885 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 3915705: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>3607885
MCGIVGVLGHNQAAPLLVEALKRLEYRGYDSAGVATVQDGHLDRRRAMGKLVNLSDLLVE
NPLAGKAGIGHTRWATHGVPSVSNAHPHQAGPVAVVHNGIIENFRALRAELIADGANFES
ETDTETIAQLCARELRAGATPVEAARRTIARLEGAFALCFLFDGHDDLLIAARKGSPLAI
GHGDGEMFVGSDALALHPMTDRITYLEEGDWAVVTRAGVQVFDARDTEVLRPETHARIDG
TQIGKGGHRHFMAKEIAEQPSVISDVLGHYTKTGTRIDMPAELPDFAQIDRLILVACGTA
FYACQTAKYWFEQLTGLPVDIDIASEFRYRSPPIGPRTAALFVSQSGETADTLAALRYCA
GKADHILSICNVPQSSIARESTVALPTLAGVEIGVASTKAFTCQLTVLALLALHAARQRG
HCDDATLAEHLTALRGLPGLLNLALGQEAEIETVSRELAEARDILFLGRGAMYPIALEGA
LKLKEISYIHAEGYASGELKHGPIALVDPAVPVIVFAPTDPLFDKTVSNMQEVMARQGKV
LLVSDATGLDTAGPGSWATIQMPHVSPFLAPILYAIPAQLLAYHTAVAKGTDVDQPRNLA
KSVTVE