PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 3608254 (298 amino acids)

SeqID: 3608254 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        CytoplasmicMembrane           [matched 119898: Iron(III) dicitrate transport ATP-binding protein fecE]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    7.88
    Cytoplasmic            2.11
    Periplasmic            0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    CytoplasmicMembrane    7.88

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>3608254
MPEAAAIETPVPIGLRARGVTVTYRNGLTALNDASFEIPQGSITALVGVNGAGKSTLFKA
IMGFVPVAKGEIEVMGGTVAAALKANKIAYVPQNEEVDWSFPVLVEDVVMMGRYGHMGLL
RIPSAKDRQAVQEALARVGMAEFRTRQIGELSGGQRKRVFLARALAQNGQVILLDEPFTG
VDVQTEEAIIALLRDLRDEGRVMLVSTHNLGSVPEFCDRTILMKGTVLGYGPTETTFTQA
NLERAFGGVLRHFVLEGADLHDDDDARKVMIFTDDERPLVTYDEKTRTLTSPDEGDTR