PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 3608652 (592 amino acids)

SeqID: 3608652 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 39932462: Sulfoacetaldehyde acetyltransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>3608652
MRMTTEEAFIKVLQRHGVDHAFGIIGSAMMPISDLFPEAGITFWDCAHEGSAGMMADGFT
RASGRMSMMIAQNGPGITNFVTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEVAQMKLF
EDMVAYQEEVRDPSRMAEVLTRVISKAKTLSGPAQINIPRDFWTQVIDIEIPEPIEFERS
PGGEASVARAAALLSEAKNPVILNGAGVVLSEGGIAASKALAERLDAPVCVGYQHNDAFP
GGHPLFAGPLGYNGSKAAMELISEADVVLALGTRLNPFSTLPGYGMEYWPADAKIIQVDI
NSDRIGLTKKISVGIVGDAAKVARGILGQLAEDAGDAGRQERRDRIAQVKSRWAQQLSAM
DHEEDDPGTTWNARARAAKPDWMSPRMAWRAITAALPRDAIISSDIGNNCAIGNAYPDFD
APRKYLAPGLFGPCGYGLPAIVGAKIAQPDTPVVGFAGDGAFGIAVNELTAIGRGDWPAI
TQVVFRNYQWGAEKRNSTLWFDDNFVGTELDEEVSYAGIARACGLDGVVVRTMQELTDTL
ATAIKAQMTEGKTTLIEVLLNQELGEPFRRDAMKKPNKVAGVSKQDMMVEAG