PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 5210100 (584 amino acids)

SeqID: 5210100 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599943: phosphoglucosamine mutase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>5210100
MQTQIQARIKHWLSLDSDAKSRAEIQALVDQGAQEELVARFAGRLTFGTAGIRGVVGAGP
MRMNRLVVQQTSKGVAEYLKAQVENAVSRGVVIGYDGRHDSKQFAEDAASVLTAAGFKVF
LTSKVAPTPLVAFGVLHLGAAAGIVVTASHNPPQYNGYKVYWGNGAQIIPPHDTGIAARI
ELAANSPVDMLPLETAVETGKLVMLEEDYYQAYRQGVLNAEVLQSPARPELVSLAYTAMH
GVGAEMAETLLKDIGVTQVYSVAAQREPDGDFPTVNFPNPEEAGAMVLVMAEAHKHGAML
ACANDPDADRFAVAVRKPAATPEMLASEAYQMLTGDQVGVLLGHYLLSHASDDQRLLCCT
IVSSSLLTRISEACGARCETTLTGFKWLTNVGMSKQTQENRFLFAYEEALGYTVGSMVWD
KDGLSALVAFVQLTAELAAKGETLWDRLETIYRQYGYYLNRQVSIALSGEPGAPTIGEQL
RALDPSEIAGRALVSVDDISLGVRRFADGREETIDLPRSDVLIYRLQGNARVIVRPSGTE
PKVKCYYEVVEPFGEQEGLADVQRRAEAAMAEFVSRHQAGLPNA