PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 5210391 (443 amino acids)

SeqID: 5210391 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599943: phosphoglucosamine mutase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>5210391
MRKFFGTDGIRGKVGAGKMTPELALKLGWAAGRVLSRTGTKKVIIGKDTRISGYLFESAM
EAGLSAAGLNVMLMGPMPTPAVAYLTRTFRAEAGVVISASHNPYYDNGIKFFSTDGSKLD
DEVELEIERELEKPLECVESHLLGKVSRIEDAAGRYIEYCKGNFPAEHTLNGLKIVVDCA
HGATYHIAPSVFRELGAEVITIGDKPDGININHEVGATSMGKIRETVIAEKADLGIALDG
DGDRIMMVNRHGKVIDGDEILYILACDAQDRGVLKGGVVGTLMSNLGLDLALKARDIPFA
RSKVGDRYVMELLKEKDWRIGGENSGHILNLDHGTTGDGIVAGILVLAAMCRKQATLEEL
TEGIKMLPQVLVNVRFEGTHNPLEADSVLSAQAEVEAKLGERGRVLLRKSGTEPLIRVMV
EGDVASDVKAHANYIAEAIKALV