PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 5210610 (590 amino acids)

SeqID: 5210610 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598655: probable glutamine amidotransferase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>5210610
MCGIAGELSFTTSAKVDQVAAMLDKLAPRGPDGQGLYSLGPCCLGHRRLKIIDLSEHGAQ
PMVDAELGLTLVFNGCIYNYRALRAELSELGYHFFSHSDSEVILKAYAHWGRQCVEKFNG
MFAFAIHERDTGRLFIARDRLGIKPLYYFKDGHSLVFASSLPALLRHPVADTEIDPQSLN
HYLCFRAIVGDKTLFKQIHKLEAAHWMLVRPDGQVDHQSYWHLSPGSSLETETEETWSQQ
LEQKLFDSAKRRLEADVPVGVLLSGGLDSSLIVGLLHELGQKEIHTFSIGFDDVADEQGN
EFKYSDLIAEHYQTRHQKIVVSHSELISHLPDCVMAMSEPMVSHDVIGFYLLSKTVSQHV
KVVQSGQGADEVFGGYHWYPPMVDATAEDEAQTYQDAYFSWQYPEYQQLVAEPLLDGDHA
GDYVRRYFAHCPAETAIDKTLMLDTRVMLVDDPVKRVDNMTMAFGLEARVPFLDHELVEL
ASRIPFDLKLKEGGKYLLKQVARRIIPHQVIDRPKGYFPVPGLRNMQGPYLALAKEVFAR
PQARARGIFNMDYIDAMLASPEQQLTRFGSRLWQVTLLELWLQLHLDHES