PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 5211244 (451 amino acids)

SeqID: 5211244 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16131372: glutathione oxidoreductase [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>5211244
MAQHFDYICLGAGSGGIASANRAAMRGAKVLLIEAKALGGTCVNVGCVPKKVMWYGAQVA
EAMHLYAKDYGFDVSVNKFDWSKLVESREAYIERIHGAYDRGLDSNGVTLVRGYGQFVDN
NTIEVNGEHYSADHILIATGGTPTIPNIPGAEYGIDSDGFFALNEQPKRVAVVGAGYIAV
ELAGVLHALGSETHLFVRKHAPLRSFDPMLSEALMESMATDGPSLHTHSIPESVTKNADG
SLTLKLENGESYEIDTLIWAIGRRPSTDKIGLENTDVKLNDKGYVVVDAQQNTTAKGIYC
VGDIIEGGIELTPVAVKAGRLLSEHLFNGMTDAKMDYSLVPTVVFSHPAIGTMGLTEPEA
IAQYGEENVKVYNSGFTSMYTAVTAHRQACKMKLVCAGKEEKVVGIHGIGYGMDEILQGF
GVAIKMGATKADFDAVVAIHPTGAEEFVTMR