PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 5211333 (738 amino acids)

SeqID: 5211333 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            OuterMembrane                 [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    OuterMembrane          9.52
    Extracellular          0.38
    Periplasmic            0.09
    CytoplasmicMembrane    0.01
    Cytoplasmic            0.00
  Final Prediction:
    OuterMembrane          9.52

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>5211333
MTRLPALSVRRLLLLSLSLLCSLPSVSVAQASEYRDLLNYRGTPSNMEQRDPQGNLTIPA
VYMDQGAWHGFHLPDSPAYYGGFTGPLFIAQEYSLHLSDSLQKLQLFSGESGQSVDLAKA
EQVEIYSEPWGLVQRFRFKDLELSTTLEYSDNRTAIVSTRLINLSDKPGSWRLSWSGSPF
ATHPKLKQYRLVDKRLLSEDAVTWQFTPIDQTWQMQLDDASYRLAFEQAVTLSVEGPQGY
RADSGLLTLAPGEATVLRAAHQYFHTQVEARHAAKLDWPTVTAKLAVNRSRWQQRLDKLV
RGGELPARRLAAKSMMTLLHNWRSPAGALLHDAVTPSVTYKWFNGVWAWDSWKQAVALAQ
FDVALAELNVLAMFDYQFDAKDPLRPEDAGNLPDAIFYNPDASRGGKGGNWNERNGKPPL
AAWAVWQIYQQSQDKALITRLYPKLVAYHEWWYRNRDHNHNGLAEYGANRHPRHGEPGEP
GEPGEPDREAVIEAAAWESGMDNAPRFDMGDELQVLENYDAKGRLLGYSISQESVDLNSY
LYAEKGYLAQMAELLDLDSEAAVWREQAARLGQLIRSEFFDEESGFFYDRRLAGERSRLM
IAEGKGVEGWLPLWAGAASQAQAEQMIATQLNASNFGTKLPFPTVSADNSAFAPRRYWRG
PVWLDQALFGLQGVSRYGHDELARRLATRLVNEADGVLGDGPIRENYDPLTGDGLHCTNF
SWSASVLLLIYRSWLSTD