PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 7024753 (703 amino acids)

SeqID: 7024753 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [1 internal helix found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    2.50
    OuterMembrane          2.50
    Periplasmic            2.50
    Extracellular          2.50
    Cytoplasmic            0.00
  Final Prediction:
    Unknown

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>7024753
MFSNPLTHVRHINSPKRHSRHWAASLFTPSLLALSIGSLLCTSATAQTLNLSSPDKQIVL
SLSDDTGRPEYQIHFHGKSIIEPSRLGLVFASLGELGQGLRIKSSHSASADEQWQQPWGE
QEWIKDQHNQLSVVLTDGKIDLNLEFKAFDDGIGFRYHLAAQHALPNNTPLAITDELTEF
NIGQSDKATAWWIPSRGWNRYEYLYRTSALNQVDRAHTPFTFKLVDGTHLSIHEAALVDF
ASMTLDQQRDGKLKADLTPWSDGIRVKTQAGFYTPWRTIQIADKATGLLNSHLILNLNEP
NKLGDVSWVKPGKYVGIWWGMHLNENTWGSGPTHGATTSETERYMDFAAKYQFDGVLVEG
WNQGWDGDWFHNGDQFSFTKAYDDFDLPAITAYGAKKGVRLIGHHETAGSVTHYRNQMDD
AFALYEKHGVTQVKTGYVADGGQIKRIDENGITRHEWHDGQFMVGEYLHSVTEAAKHHIS
INSHEPIKDTGLRRTYPNWLAREGARGQEYNAWGSPPNNPEHTAMLPFTRMLAGPMDFTP
GIFDLAPKGLDAENRVQTTLMKQLALYVVLYSPIQMAADLPRNYQKHLDAFQFIRDVPTD
WYQSIALAGEVGDYVVFARQAKDQQDWYLGALTDENTREVKVKLDFLDPNKRYQAQIYRD
GAKADWKTNPYDYVIETKEVNAKDSLTLQLASSGGTAIRFKAL