PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 7026140 (1244 amino acids)

SeqID: 7026140 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597040: methionine synthase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>7026140
MAISLHRASQTLADIRNQLSKRILILDGAMGTMIQGYKLEEEDYRGERFKDWHTDVKGNN
DLLVLTQPHIIKQIHIDYLKAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLARE
ACDEIEQATGKPRYVAGVLGPTNRTCSISPDVNDPGYRNIHFDELVTAYCESTRALIEGG
ADIIMVETIFDTLNAKAALFAIETVFDELFGPNSPARLPVMISGTITDASGRTLTGQTTE
AFYNSLRHIKPLSIGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPE
DMASVIQEWAREGMLNIIGGCCGSTPEHIKVIREAVEPFAPRVLPEIPVACRLSGLEPLT
IDAQTLFVNVGERTNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDG
VEVMHKFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQ
ATLVKRYGAAAIIMAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIA
TGIDEHDNYAVDFIEAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIK
VGMDMGIVNAGQLAIYDDIDPELKDKVENVVLNLHCPVEDSNNTEQLLEIAEKFRGDGSS
SAKKEDLEWRSWPVNQRLAHALVKGITEFIDEDTEAARQLASRPLDVIEGPLMDGMNIVG
DLFGSGKMFLPQVVKSARVMKKAVAYLNPFIEQEKVEGQSNGRILMVTVKGDVHDIGKNI
VGVVLACNGFEVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREG
LTIPAIIGGATCSKIHTAVKIAPHYPHGAIYIADASRAVPMVSKLVSNETRQATIDETYA
EYEEMRIKRLSQTKRKEIVSLEAARENRCQHDWANYTPFKPNVLGRQVFDDYPLTDLVDR
IDWTPFFRAWELHGHYPEILTDKVVGVEAQKLFADGQAMLKKIIDEKWLTAKGVIGLFPA
NTVGFDDIELYTDETRTEVEMTTHHLRMQLERVGNDNFCLADFVAPKDSGVADYMGGFAV
TAGHGIDEHIARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNE
ALIREKYKGIRPAPGYPACPDHTEKGLLWDLLKPNETIDLNITESYAMFPTAAVSGWYFA
HPKSRYFGVTNIGRDQVEDYAKRKGMTVAETEKWLAPVLDYDPE