PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8499536 (320 amino acids)

SeqID: 8499536 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15600516: acetylglutamate kinase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8499536
MSQTEQAASCCADPAAYAKLQSKVLIECLPYMRQFHGQTVVIKYGGHAMKDEALKKAFAL
NIALLKQVGINPVVVHGGGPQIGRMLEQLHIQSQFREGLRVTDDATMDVVEMVLVGKVNK
EIVNLLNLSGVKAVGLSGKDGQLIRARKMEMIVNGGNHAPEIIDLGKVGEVMRVETTLLR
SLERDNFVPVIAPVGVDENGETYNINADAVAGAVAAALRAKRLLLLTDVAGILDKQKELI
RSLTTREAVELFTDGTLTGGMIPKVKCCLEALEEGVEKAMIVDGRVENCILLELFTDKGI
STEIVGERGMRAAVSCGCRR