PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8500795 (645 amino acids)

SeqID: 8500795 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Periplasmic                   [matched 34395944: Periplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            5.41
    Periplasmic            4.48
    CytoplasmicMembrane    0.06
    Extracellular          0.05
    OuterMembrane          0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8500795
MYEVRELARNRTLQQWSVEDSAELYGIRNWGAGYFDVAQSGDVVVYPFGDNRGPAVSIPE
IIRGMRERGYDMPVLLRIENILDSQITSLHQSFRKAIGSLGYKGEYRGIFPIKVNQQQQV
VEKIAQFGSRYHHGLEVGSKAELIAAVSQLRDHEACLVCNGYKDEEFIDLGLHAVRMGYK
CFFVLEMASELPLILERSKCLGVRPLIGVRAKLSVKAGGHWTDSGGERSTFGLTTAQIVD
VVDQLKDHDMLDCFQLLHYHLGSQVPNIRDIRAAVMEACRIYGGLVAEGAAMGYLDLGGG
LAVDYDGSHTNYVSSRNYSLDEYCADIIEAVMNILDEEGIAHPHIVTESGRATVAYYSML
LFNILDVSRVEIGNLPDILPDDCPEPVRNMREALAGLTLRNLQECYNDAVYYRDEVRQQF
LTGRITLRERTLGERYFWAIMKRIAQEKQKLKHVPKDLAEIDVALADIYYGNFSVFQSLP
DSWAIDQLFPVVPLHRLNELPSRQGILSDITCDSDGRIDHFIDPQGVKGTLDLHPLKDGE
EYYLGVFLVGAYQETLGDLHNLLGDTNVVSVRVHEDGSYEFVRELRGDSVADILSYVEYD
PRRIIDDIREAAEQAVREGRITPSDRYRVMQAYEDGLRGYTYFER