PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8500852 (726 amino acids)

SeqID: 8500852 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 6226621: Glutamine synthetase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8500852
MSGIQARLNAISAITNYKPSAAPMNFAETKPTELFGCNVFNDKVMKDRLPKTVYKSLKKT
IELGEKLDPSIADVVANAMKDWAIEKGATHFTHVFYPLTGLTAEKHDAFLVPDGKGGALS
EFSGKLLIQGEPDASSFPSGGLRATFEARGYTAWDVTSPAYLLENPNGTFLCIPTAFVSW
TGEALDKKTPLLRANQALNKQAQRVLKLFGTETKLPLVSYAGPEQEYFLIDRNFAFARPD
LHICGRSLFGAKPAKGQEFEDQYFGVIPRRVLSFMMEVERELFKLGVPVKTRHNEVAPSQ
YEIAPIFETSNLATDHNQLIMTVLRSVAKRYGMVCLLHEKPFAGINGSGKHLNYSIGNAD
LGSLFDPGESPHENAQFLVFCAAAIRAVHKYGALLRATVASASNDHRLGANEAPPAIMSV
YLGEQLTDVFEQIKTGKVNGCKKACVMNIGVDVLPPLPMDPGDRNRTSPFAFTGNRFEFR
AVGSSMSIAGPQVALNTMMAESLDYIATELEKATKGDPAKLNEAVQKLLQKIMKEHDKVI
FNGDGYSEEWHKEAERRGLPNLKTTPDALPVLSSPEVVKLFTSYGVFSEAEVKSREEIYL
EQYCKTVKTEANLVIRMARTIIFPAAMRYQGELAATCANLKAAGHDYKVVTLEDVTTKLR
AMQAAVGELEKKLDHEAASTHAEAKHMCDVILPAMLKVREYADALEAVVADDLWALPSYQ
EMLFIK