PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8501305 (614 amino acids)

SeqID: 8501305 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Cytoplasmic                   [matched PS50862: AA_TRNA_LIGASE_II Profile - Cytoplasmic ]
    SCL-BLAST-        Cytoplasmic                   [matched 62287574: Aspartyl-tRNA synthetase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            10.00
    Periplasmic            0.00
    CytoplasmicMembrane    0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            10.00

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8501305
MSDQKLDVQQEHQQYIEPLGDWVRSHDCATLTAADTGAEVCLMGWVQYRRDHGGLIFVDL
RDRQGLTQIVFSPDVNPAAHERAHIIRSEYVLAIRGTVRPRPEGMTNPGMKTGEIEVYVS
EWKLLNTSKTPAFVIEDRTEASENLRLQYRYLDLRRPRMANNFIVRHKAAQATRRYLDEL
GFLEIETPYLTKSTPEGARDFLVPSRLNQGQFYALPQSPQLFKQLLMMSGMERYYQIVRC
FRDEDMRADRQLEFTQIDIEMSFVDEEQVMAMAEGLMARVFRDALDREIATPFPRMSYDD
AMARYGVDKPDTRFGLELQDVTHIVRGSNFKLFATAELVKAMRVPGGETMTRKEIDEFTE
FVKIYGAQGLAWIKIRPDEWQSPIAKFLSDEERAGLKDALGLETGDIVFFQAGAPGMVNA
ALGNLRVRLGEHLGLIDENAFNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHMDVMV
ENPAAARARAYDMVLNGYELGGGSIRNHTAEKQRRMFAALGFSPEEAEAQFGFLTQALEM
GAPPHGGIAFGMDRLAMLLTGSSSIRDVIAFPKTQKATCLLTQAPDSVSARQLRDLGLRL
RETGKDGAPNAPQG