PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8501342 (528 amino acids)

SeqID: 8501342 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 120601: Fumarate hydratase class II]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8501342
MPQTPDQPHLPRTPHQADMPHQANGPHRPEQPTDAQPAARPGHRLERDSMGLVEVEQGRL
WGAQTQRSLDNFRIGTDRMPLAVVHALARIKKAAALVNRDLGLLPPPPPGQPDQPGLPHM
AEAIARAADEVLAGQHDDHFPLSVWQTGSGTQTNMNVNEVLANRATQLLAEAAHAAASGG
HPHIHPPIHPNDHVNRCQSSNDAFPAAMHLAAALALRDDLLPGVRHLRDALRAKAAACAD
IVKIGRTHLQDAVPLTLGDEMSGWAAQLDACLEGLDAAMPHLCRLALGGTAVGTGLNAHP
AFAPRAIALLADMTGLPLVPAPNPFAALAAHDGLVLTSGALRALATALLKIANDVRWLAS
GPRCGIGELRLPENEPGSSIMPGKVNPTQCEALTMVAVQVMGLDVAVGMAGSQGNFELNV
FKPLIIHNVLTSMRLLADGCRSFADHAVAGMQPDRAGIAAHVGRSLMLVTALAPVVGYDR
AAQAAHRAHAQGITLREACLEMQLLDGAAFDAAVDPLRMARPHEGHEG