PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8502455 (269 amino acids)

SeqID: 8502455 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [1 internal helix found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 71159808: Pyrroline-5-carboxylate reductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8502455
MGTVLGCIGCGNMGAAILRGLSGRQGLSLLGYNPTPAKVLALADAGVRAMPDAATLAAQA
DVVLLGVKPYLVPDVLRAIAPSLTPGKVVVSIASGVSIAAMKAAIAEAGGPECPVVRVMP
NTPAMVGKGVYALCFEDPALDVPRRDLVRGLFESIGTVIVLPEARFTAFTAVVGCGPAYV
FYFMEAVTEVAVTLGFTRQDATELVKGLFSGSVALAEQSGTHLSVLREQVCSPAGNTIAA
MNQLDREAVRGRIMDAVLAAYRRGLEMEK