PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO353_12280 (401 amino acids)

SeqID: AO353_12280 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [1 internal helix found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15600285: imidazolone-5-propionate hydrolase HutI[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO353_12280
MKTLWQHCHVASMAQGTYSIIEDAAIVTSGAHIEWIGPRSELPSGEYLEVHDLAGAWVTP
GLIDCHTHTVFGGNRSGEFEQRLQGVSYAEIAAAGGGIASTVRATRAATEDELFASAKKR
LKSLMRDGVTSIEMKSGYGLDLASERKILRVIRRLGAELPISVRSTCLAAHALPPEYVDR
ADDYIEHICSEMLPALAAEGLVDAVDAFCEYLAFSPAQVERVFVAAQKLGLPLKLHAEQL
SSLHGSSLAARYHALSADHLEFMTEEDAIAMAASGTVAVLLPGAFYFLRETQLPPMDALR
KHGVKIAIASDLNPGTSPALSVRLMLNMACTCFRMTPEEALAGATIHAATALGMERTHGS
LEVGKVADFVAWQIDRPADLSYWLGGDLEKRVVRHGVEVEL