PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO356_27690 (493 amino acids)

SeqID: AO356_27690 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61252084: Polyol:NADP oxidoreductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO356_27690
MKLNRQNLHNLNPDVALPAYPLGDIRQGIAHIGVGGFHRAHQAYYTDALMNTGVDLDWAI
CGVGLRAEDRRARDDLASQDYLFTLYELGDTDDTEVRVIGAINDMLLAEDGAQALIDKLA
DPQIRIVSLTITEGGYCIDDSNGEFMAHLPQIQHDLNHPEAPKTVFGFLCAALAKRRAAG
IPAFTLMSCDNLPHNGAVTRKALLAFAALRDAELGQWIDRNVSFPNAMVDRITPMTSVTH
RLQLHDEHGIDDAWPVVCEPFVQWVLEDKFVSGRPAWEKVGVQFTDDVSPYEEMKIKLLN
GSHLALTYLGFLKGYRFVHETMNDPLFVRYIRAYMDLDVTPQLAPVPGIDLTDYKNTLVE
RFSNQAIADQLERVCSDGSSKFPKFTVPTINRLIADGGETRRAALVVAAWAVYLKGVDEN
GVTYSIPDPRAAFCQALVADDALVTQRMLEVEEIFGTAIPRSPEFVAAFEWCCNSLREHG
VTRTLERVLADAD