PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO356_28535 (485 amino acids)

SeqID: AO356_28535 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61252084: Polyol:NADP oxidoreductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO356_28535
MPVVKRVPCTGTAAQIGIVHLGLGAFHRAHQAVYLQRHLNRHGESDWGVCSANLRSNRTL
VEQLREQDGRYHVAEYRDCEQVTLREIGVLRQALYVGEGGPDLEQLLMRMAAPQTRIVTL
TVTEKGYCLSPSSGQLRSEDPAIAHDLAHPQAPRSAPGIVLEALRRRRAAGVPAFTVLCC
DNMPDNGQRTRQAVSALAALQDEALAQWVEQQVAFPSCMVDRIVPAMDGESFRRLEQLDC
HDPAAVVCESFSQWVIEDHFPLGRPDWEVEGVQMVDDVGPFETMKLRMLNGSHSLLAYVG
LLVGHDTVFEAVSDANLLHLIGRYMADEAAPTLDMPAGIDLSVYAHDLKARFANDSLQHR
LRQIAMDGSQKLPQRWLLGAQQLLDQGRGIDCTALGIAAWIHYCTQPLPGRPAHVVDDPL
SATFADLAGRFEGASRVDAVLDLHEVFPPRLSARAVFRDAVHHAYSALTRDGVDSLLHTL
AASKR