PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS04510 (562 amino acids)

SeqID: AZOBR_RS04510 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 17367880: "Oligo-1,6-glucosidase"]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS04510
MIKDLWYKNAVIYNLSVGTFMDANGDGIGDFQGLQRRLDYLQGLGVTCLWLGPFQPSPMR
DHGYDVADYYNVDPRYGTLGDFVEFSHACKQRGIRVIIDLVVNHTSDQHPWFQAARKDPD
SPYRDWYVWSDKKPDDADQGVVFPGVQKTTWSWDKEARAYYFHRFYEFQPDLNTANPEVQ
AELLKVMGFWIELGVSGFRMDAVPFVIATKGPDVKKPKQQFDMLRTFREFVQWRCGDAVL
LAEANVLPTVDQEYFGDDGDRMQMVFNFQVNQNLFYALATADTRPLAKALDVTRVPRPST
NQWGLFLRNHDELDLGRLTEAQRKRVFDAFGPDKDMQLYDRGIRRRLAPMLRGDRRWLEL
AYSLLFTLPGTPVLRYGDEIGMGDDLSLPERECARTPMQWSDEPQGGFTKADDPVHPVIS
GGAYGYERINAAHQRRDPSALLNWTERIIRMRKECPEIGWGDFQVLPTGSNAVLAIRYDW
RNNSVLVVHNLDDRPHEIALAVDGTGESPRLVNLLAEDHNDPEEDGRHRLVLEPYGYRWY
RLGGLDYLLRRTEGPVGGAKRS