PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS09675 (608 amino acids)

SeqID: AZOBR_RS09675 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 3915705: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS09675
MCGIIGIIGTHDAAPRLVEGLRRLEYRGYDSAGVATLVKGGIERRRAEGKLINLDAKLRE
APLPGVIGIGHTRWATHGGPTENNAHPHATHRVAVVHNGIIENYQELKTELIEHGYVFES
ATDTEVIAHLVTYYMEKEGLGPVEAAAASFKRFTGAFSLVLLFSGQEDMLIGARHGTPLA
VGYGEGEMYFASDAFALAPLTNRICYLEDGDWVELTRTAAVIHDATDAVVERPVKTTALS
GALIGKDGYRHYMLKEIYEQPQVIGDTLNAYINPETGRVTLPETSFDIAKATKLTIVACG
TAYYAGVVAKYWFETLARLPVEVDIASEFRYREAPLPEGGVALFISQSGETLDTLEALRY
CKRQGQKILSIVNVPESTIARESDAVLYTMAGPEIGVASTKAFTTQLTTLACLAVTVGHA
RGVIPAERMQQIAQALREVPARAADVLAHDERLHELAQEVAEARDVLYLGRGAMYPLALE
GALKLKEISYIHAEGYAAGELKHGPIALIDESVPVIVLVPSDNLFEKTVSNVQEVCARSG
KVLLIADKKGIDKLSDKVRWSLELPACDPLVAPLLYAIPVQLLAYHVAVLKGTDVDQPRN
LAKSVTVE