PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS09745 (450 amino acids)

SeqID: AZOBR_RS09745 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 20141393: Glutathione reductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    Periplasmic            4.99
    CytoplasmicMembrane    4.90
    Extracellular          0.10
    OuterMembrane          0.00
    Cytoplasmic            0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS09745
VAEFDFDLFTIGAGSGGVAASRRAAAMGAKVAICEGSRVGGTCVIRGCVPKKLLVYAAQF
RDAFEDSSAYGWSTTMPAFDWATLIGRKDAEIDRLNGIYIKMLENSGVTLHTGFGRLIDR
HTVEVANQRYTAKNILVATGGWPALPKIPGIEHAVTSNEALQLGTLPHSVIILGGGYIAV
EFAGIFRGLGAEVTIMIRGEELLNGFDDDIRVALAQEMRKRGITILTRTQPVKVEDGPGG
FTVTDQLGREHSAGLVMAATGRRPNTRDLGLEAAGVALDDAGAIRVDEYSRTSVDNIFAV
GDVTDRMALTPVAIAEGRAFVETLFNDNPTSISYANIPTAVFSIPPLGTVGLTEAEARAK
FATVDIYKAGFRPMKHTMSGRDERVLMKLVVDGESQRVLGCHMMGMDAPEIVQGLGIALN
CGATKRDFDRTIALHPSTAEEFVLMREKVS