PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS25530 (346 amino acids)

SeqID: AZOBR_RS25530 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 62297827: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS25530
MTSAPLMMQEAVTAPAAVRRLLDSDTAAVAALADRLRAVPPPFAMTIARGSSDHAAGYAR
YLFETALGLVTASAAPSVVTAYGADLRVKDAFVLAISQSGQSPDLLCVAEAARAGGAVTA
ALVNAEDAPLAERVAHPLPLHAGPELSVAATKSFVASLAAIARLTAVWMDDRTLLDALPR
LPFWLERAGAADWSAALPVLEAVSSLLIVARGRSYPIAQEMALKFKETAAAHAEPFSAAE
VMHGPMALVEPGFPVLVVAVRDETLDGVLDTARALKEAGAHLLVASAEERALALADTPLL
LPPPLHPVLDPIAAIQAFYPFMARLAVARGFDPDRPRHLRKVTRTI