PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS29210 (266 amino acids)

SeqID: AZOBR_RS29210 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596826: probable enoyl-CoA hydratase/isomerase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS29210
MSDPIIFENDDGIVTLTINRPETRNPISDPDMIEAMLEALDRIDRDLSIRTAILTGTGTS
FSSGGNLKTMGEQGGINDPLPAQTRRNYKFGIQRLPLAFEALEVPIIAAVNGPAIGAGCD
LACMCDLRIAAERAVFAESFVKVGIVPGDGGAWLLPRVVGFSKACEMALTGDPIDAAEAL
ACGLVSKVVPNDELLAEARKLAMRIAANPPHAVRMTKRLLREGRNATLDHLLELSAAMQA
LAHATADHKEAVAALLGKRPPSFTGH