PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ac3H11_3150 (866 amino acids)

SeqID: Ac3H11_3150 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596984: aconitate hydratase 2[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ac3H11_3150
MLKAYRDHVAERAALGIPPLPLDAKQVAELIELIKNPPAGEDAFLLDLLTHRVPPGVDDA
AKVKASFLAAVAHGDVKVGLISKSKATELLGTMVGGYNVHPLIELLDDAEVAGVAADALK
KTLLMFDFFNDVATKAKAGNAKAQEVMQSWANAEWFTSRPEVEKKITVTVFKVPGETNTD
DLSPAPDAWSRPDIPLHYLAMLKNTRPDAAFKPEEDGKRGPMQFIDDLKKKGHLVAYVGD
VVGTGSSRKSATNSIVWATGQDIPFVPNKRFGGVTLGGKIAPIFFNTQEDSGSLPIEVDV
SKLEMGDVIDVLPYDGKIVKDGATVAEFQLKSDVLFDEVRAGGRINLIIGRSLTAKAREF
LGLPASTAFRLPTAPVATNAGFTLAQKMVGRAVGLPEGQGVRPGTYCEPKMTTVGSQDTT
GPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVKTHRELPAFISNRGGVALRPGDG
VIHSWLNRLLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFGAATGVMPLDMPESILVRFK
GDMQPGVTLRDLVHAIPLYAIKAGLLTVAKAGKINAFSGRILEIEGLPDLKVEQAFELSD
ASAERSAAGCTIKLNPEPIKEYLTSNIVLMKNMIADGYADAKTLQRRIEKVEAWLAKPDL
LEADKDAEYAAVIEIDLADIKEPIVCCPNDPDDAKFLSEVSGTKIDEAFIGSCMTNIGHF
RAAAKLLGGQRDIPVKLWVAPPTKMDESELIKEGHYAAFGTAGARTEMPGCSLCMGNQAQ
VREGATVISTSTRNFPNRLGKNTNVFLGSAELAAIASRLGYLPSKEEYLKEMGVIDADKA
SVYRYMNFDQIEEYAEAAKGAAVASC