PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BPHYT_RS25815 (336 amino acids)

SeqID: BPHYT_RS25815 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16132198: 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BPHYT_RS25815
MPEAPLQSSSVVALRGTPIVHPERNPGMPFDASWLDGLRVNQSAVERRTATLGTRRSVKK
DAQAAWLLKAVTCIDLTTLNGDDTEGRVRRLCAKARQPVRADLLEALGLAPQGITTGAVC
VYHRFVAAAVDALHGSGIPVAAVSTGFPAGLIPHPLKLKEIEASVADGAQEIDIVVTREY
VLTGNWQALYDEVRDFRAACGPAHLKTILATGDIRTLSNVARASMVCMMAGADFIKTSTG
KEGVNATLDVSLVMVRMIREYQERTGVLIGFKPAGGVSTAKSVLSYQILMKEELGRAWLE
PELFRIGASSLLADIERQLEHYVSGRYSAFNRHPVA