PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BPHYT_RS30220 (465 amino acids)

SeqID: BPHYT_RS30220 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 39932236: Taurine--pyruvate aminotransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BPHYT_RS30220
MPIQSLIEADRKHLIHPVINYRAHEARGVTVLESASGAFLRDAAGNELLDAFSGLWCVNV
GYGQQSIVDAATAQMQKLPYATGYFHFGSEPAIELAQKLVEVSPASLQHVYFTLGGSDAV
DSALRFITHYFNSTGRPSKKHIIALQRGYHGSSTTGAGLTALPAFHRNFDLPLPNQHHLP
SPYAYRNDFADDAALIAASVAALEAKVAELGADNVAAFFCEPIQGSGGVIVPPVGWLKAM
RESCRKLGILFVADEVITGFGRTGPLFACQGENVEPDLMTVAKGLTAGYAPMGAVLMSDE
IYQGIADSHAEAVVGHGHTYSAHPVSAAIGLEVLRLYHEGGLLANGVARAPRFARGLDAL
LAHPLVGDSRHRGLLGALELVADKDSKAGFDPALKLSERIAAAAYENRLIFRAFGDNILG
FAPALSYTEAEFDLMFERLEKTLDDVLAQADVRAALKVKTHAIAC