PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS09870 (396 amino acids)

SeqID: BWI76_RS09870 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 112989: Aspartate aminotransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS09870
MFENITAAPADPILGLADLFRADDRPTKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE
TTKNYLSIDGIPEFGRCTQELLFGKGSAIINDKRARTAQTPGGTGGLRVAADFLAKNTDA
KRIWVSNPSWPNHKSVFNSAGLEVREYTYYDAANHKLDFDGLLASLNEAQAGDVVLFHGC
CHNPTGIDPTLEQWQQLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAALHKELLV
SSSYSKNFGLYNERVGACTLVAADQETVDRAFSQMKSVIRANYSNPPAHGASVVATILSN
DALRAIWEQELTDMRQRIQRMRLLFVNTLQEKGASRDFSFIIQQNGMFSFSGLTKEQVLR
LREEFGIYAVASGRINVAGMTPDNMAPLCEAIVAVL