PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS14780 (323 amino acids)

SeqID: BWI76_RS14780 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        CytoplasmicMembrane           [matched 61229330: Parathion hydrolase precursor]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    7.88
    Cytoplasmic            2.11
    Periplasmic            0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    CytoplasmicMembrane    7.88

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS14780
MGIIRTLNGDISAHQLGVTYSHDHIYCIPPYWAERQDDDLLLDDPQASERELSDFREAGG
RAIYDATAPDYGRQAAAVAAMAQRQQLHIIATAGFNKGFLWSSKRPGSAQTFAEWIEHSE
IDELVEHVCREVTEGIEGTAHRAGVVKCGTGYNTISPLEEKTMEVIVRAQQRTGAPMHSH
TEMGTMGLEQARIFKKWGLDLSRLCFAHMDRNPDPWLHRQIANTGAFLSFDGISRIKYHP
EHIRTQAILALCQRGYQKQILIGGDFARKSMSAHYGKGGLGLKFILNDWRPRFLEEAREA
GFDGEALLHDFFVDNPARYLAFA