PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS24175 (712 amino acids)

SeqID: BWI76_RS24175 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16131943: biodegradative arginine decarboxylase [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS24175
MKSMHIAASRELVSRLSTHRRVVALDSTDFTDVAAVVITVADSRSGILALLKRTGFNLPV
YLFSEADHEKPQGVMAIVSGKEQEWLELEAAACGYEENLLPPFFDTLTQYVEMDNSTFAC
PGHQHGAFFKKHPAGRQFFDFFGENVFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFN
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNP
FGFIGGIDDRCFDEKYLRDLIRETAPEKADMPRPFRLAVIQLGTYDGTVYNARQVVDKIG
SLCDYILFDSAWVGYEQFIPMMADCSPLLLDLTPDDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHLRGQERFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVALG
IEARKAIIANCKMIQPFIPPVVAGRPWQDHPTEAIARERRFFSFEPGARWHGFEGYASDQ
YFVDPCKLLLTTPGIDAESGKYTDFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAES
AEKLAQLVAMLARFEQHIESDTPLADVLPTIFNKYPVRYRDYTIRELCQEMHNLYVSFDV
KDLQKEMFRKKSFPRAVMNPQDANREFIRGNVELVRLSAAEGRIAAEGALPYPPGVLCVV
PGEIWGGAVLRYFLALEEGVNMLPGFSPELQGVYSETDPDGIKRLYGYVLKA