PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS27165 (382 amino acids)

SeqID: BWI76_RS27165 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61252084: Polyol:NADP oxidoreductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS27165
MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGENEQVDTV
SGVDAVSSIGDEVVELIASVDLVTTAVGPVVLERIAPAIAKGLAKRKAQGVTAPLNIIAC
ENMVRGTSQLKGHVFNALAEEDKAWVETNVGFVDSAVDRIVPPSASATHDPLEVTVETFS
EWIVDKTQFKGELPDIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAIL
DENIRAVVKGAMEESGAVLIKRYAFDAQKHAAYIQKIIGRFENPYLKDDVERVGRQPLRK
LSAGDRLIKPLLGTLEYGLPHRNLVKGIAAAMHFRSEEDPQAQELAALIAEKGPQAALAQ
ISGLDAASEVVAEAVNDYSATK