PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on CA265_RS00430 FitnessBrowser__Pedo557:CA265_RS00430 (283 amino acids)

SeqID: CA265_RS00430 FitnessBrowser__Pedo557:CA265_RS00430
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 20137723: "2,5-diketo-D-gluconic acid reductase A"]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>CA265_RS00430 FitnessBrowser__Pedo557:CA265_RS00430
METVKLNNGIEMPLLGFGVFQVTDLAECERSVLDAIDTGYRLIDTAASYMNEEAVGQAIK
NSHVPREALFVTTKLWIQSNGYTNTKKAFEASLKKLKLDYLDLYLIHQPYGDVYGEWRAM
EELYKEGKVRAIGVSNFHPDRLADLIIHNEITPAVNQIETHPFHQQLDTQRFLNENKVQI
ESWGPFAEGKHNIFNDELLLAIASQYNKSVAQVILRWLIQRGVVAIPKSVRKERMAENLN
VFDFKLSDDDMNSIKSMDTKSSSFFDHRDPAMVKWLGERKLGH