PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on CA265_RS07530 (433 amino acids)

SeqID: CA265_RS07530 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 584840: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>CA265_RS07530
MSDFSKPQTPDSKLNLTERDQKVIWHPYTQMKNALPHIPIVRGEGVYVFDESGKRYIDAV
SSWWVNIHGHSHPYIAQKVAEQLNVLEHVIFAGFTHEPAVLLAERLLPILPGKQDKVFYT
DNGSTAVEVALKMCLQYWDNKGTPKTKILAFKNAYHGDTFGAMSVSGRSIFTDAFNSLLF
DVEFIDLPNEYNISHLTSHLSNLSDTACFIFEPLILGSGGMLMYEAKYLDQLLSACKEAG
ILTIADEVMTGFGRTGTYFACEKLINKPDIICLSKGLTGGTMPLGVTTCTNEIFEAFLSD
DKLKTLYHGHSFTANPIACVASLASLDILLKSETLQNIKRVEAKHAVFLEEIKTHPKVKA
IRQTGTIIAIEWETGNETSYLSNLRNLLYAYFLDKGIILRPLGNIIYILPPYVISDEDLD
YIYATIKLALEEI