PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on CA265_RS07875 (530 amino acids)

SeqID: CA265_RS07875 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 121408: Aerobic glycerol-3-phosphate dehydrogenase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>CA265_RS07875
MKRLHPHHIAENINWDFIIIGGGATGLGTALDAASRGFKTLLVEQSDFAKGTSSRSTKLV
HGGVRYLAQGDIGLVKHALKERGLLQQNAKHLVNKEEFLIPCYDWFSVVKYLTGLTLYDW
LAGKYSFGKSKFFSKKETLTMMPGIKEKGLKGSIRYYDGKFDDARLAINIAQTAIENGAS
LLNYTKVTGLLKSGDQVTGIETEDTITGLTAKYNGKIVINATGVFVDDILQMNNPNSKKM
VRPSQGVHVVLDKSFLNSESALMIPKTSDGRVLFAVPWHDHLLVGTTDTPLDEHSLEPRA
LKKEVDFIMSTAASYFNRKPLEKDILSVFSGLRPLAAPTNGDGNSTKEISRDHKLIVSAK
GLITITGGKWTTYRRMAEETVDLAITHGGLESKACVTQNLSIHGSSTTTGDHHLAIYGTD
RSKIEALIVQDPGLGNKLNPAFPFTEAEVIWSARNEMAETVEDILSRRLRILFINAQAAK
DMAPRVASLLAQELSADKNWETNQIETFNKLADGYIYHSTPKITESALAN