PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Dsui_1557 (394 amino acids)

SeqID: Dsui_1557 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 1730514: Phosphoglycerate kinase, plasmid]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Dsui_1557
MNVLKLADLDVKGKRVFIRADLNVPQDETGRITDDTRIRASVPAIQMALEKGAAVMVTSH
LGRPTEGEMKPEDSLAPIAHRLAELLGRKVPVIDNWVDGGFEVKPGDVVLLENCRVNKGE
KKNNDELAQKLAKLCDVYVNDAFGTAHRAEATTHGIAKYAPVACAGPLLGAELDALGRAL
ENPKRPLVAIVAGSKVSTKLTILKSLAGKVDQLIVGGGIANTFMVADDLPIGESLAELDL
VEEARNIMDMMDERGASVPIPEDVVVANELSVHARANRVDANDVQPDDMILDIGPKTSAK
LASIIAHAGTIVWNGPVGVFEFDQFGGGTKMLAAAIAHSPAFSIAGGGDTLAAIAKYGIE
KQIDYISTGGGAFLEFLEGKKLPAVEVLEQRANG