PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Dsui_1576 (581 amino acids)

SeqID: Dsui_1576 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 71159292: Dihydrolipoyl dehydrogenase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Dsui_1576
MSQLVEVKVPDIGDFKDVPVIEVFVKVGDTVKVEDPLVSLESDKATMDVPSSAAGVVKEI
KVKLGDKVAEGTVIVVVEAGAAAAAPAPQPAAPAAAPAPAAAPPPVAGSHGGGADVECDM
LVLGAGPGGYSAAFRSADLGLKTVLVERYPTLGGVCLNVGCIPSKALLHVAAVLEEAQHL
ADCGVTFAAPQVDVDKLRAHKEKVVGKLTGGLAGMAKGRKVQHVQGVGQFIDPHHIEVTA
ADGKKQVVKFKNAIIAAGSQPVALPFMPKDDPRVIDSTGALELRSVPKKMLVIGGGIIGL
EMATVYSALGTRITVVELGPGLMPGADRDLVKVWEKKNTQRFDRILLATGVTAAEAKAEG
IEVTYSTGEKEAFDLVLVAVGRTPNGKKIAADKAGVAVTDRGFINVDAQMRTNVPHIFAI
GDIVGQPMLAHKAVHEAHVAAEVAAGEKAAFDALQIPSVAYTHPEIAWAGKTEDQLKNDG
IKFEKAVFPWAASGRAIANGAEEGFTKLLFDAESHRLLGGGIVGMNAGDLIGEVCLAVEM
GCDAVDIGKTIHPHPTLCESIGMAAEVAHGSCTDLPPMKKK